From 02884d7b923597d15ccecd598e73675b5074a1eb Mon Sep 17 00:00:00 2001 From: Heng Li Date: Fri, 13 Feb 2009 09:54:45 +0000 Subject: [PATCH] * samtools-0.1.2-7 * fixed a minor bug in flagstat --- bam_stat.c | 4 ++-- bamtk.c | 2 +- 2 files changed, 3 insertions(+), 3 deletions(-) diff --git a/bam_stat.c b/bam_stat.c index 1429336..a4522da 100644 --- a/bam_stat.c +++ b/bam_stat.c @@ -62,9 +62,9 @@ int bam_flagstat(int argc, char *argv[]) printf("%lld paired in sequencing\n", s->n_pair_all); printf("%lld read1\n", s->n_read1); printf("%lld read2\n", s->n_read2); - printf("%lld properly paired (%.2f%%)\n", s->n_pair_good, (float)s->n_pair_good / s->n_reads * 100.0); + printf("%lld properly paired (%.2f%%)\n", s->n_pair_good, (float)s->n_pair_good / s->n_pair_all * 100.0); printf("%lld with itself and mate mapped\n", s->n_pair_map); - printf("%lld singletons (%.2f%%)\n", s->n_sgltn, (float)s->n_sgltn / s->n_reads * 100.0); + printf("%lld singletons (%.2f%%)\n", s->n_sgltn, (float)s->n_sgltn / s->n_pair_all * 100.0); printf("%lld with mate mapped to a different chr\n", s->n_diffchr); printf("%lld with mate mapped to a different chr (mapQ>=5)\n", s->n_diffhigh); free(s); diff --git a/bamtk.c b/bamtk.c index b0eec6e..65b7d69 100644 --- a/bamtk.c +++ b/bamtk.c @@ -3,7 +3,7 @@ #include "bam.h" #ifndef PACKAGE_VERSION -#define PACKAGE_VERSION "0.1.2-6" +#define PACKAGE_VERSION "0.1.2-7" #endif int bam_taf2baf(int argc, char *argv[]); -- 2.39.5