From 0abdf800c25b306eb2f494d4f3516b598ae82b2d Mon Sep 17 00:00:00 2001 From: derek Date: Mon, 15 Nov 2010 14:54:27 -0500 Subject: [PATCH] Minor formatting cleanup --- src/toolkit/bamtools_coverage.cpp | 6 +----- src/utils/bamtools_pileup_engine.h | 2 +- 2 files changed, 2 insertions(+), 6 deletions(-) diff --git a/src/toolkit/bamtools_coverage.cpp b/src/toolkit/bamtools_coverage.cpp index d46ba20..8a7fce2 100644 --- a/src/toolkit/bamtools_coverage.cpp +++ b/src/toolkit/bamtools_coverage.cpp @@ -36,12 +36,8 @@ class CoverageVisitor : public PileupVisitor { // PileupVisitor interface implementation public: -// void Visit(const int& refId, const int& position, const vector& alignments) { + // prints coverage results ( tab-delimited ) void Visit(const PileupPosition& pileupData) { - // ----------------------------------------- - // print coverage results ( tab-delimited ) - // <0-based pos> -// *m_out << m_references[refId].RefName << "\t" << position << "\t" << alignments.size() << endl; *m_out << m_references[pileupData.RefId].RefName << "\t" << pileupData.Position << "\t" << pileupData.PileupAlignments.size() << endl; diff --git a/src/utils/bamtools_pileup_engine.h b/src/utils/bamtools_pileup_engine.h index 403c4b4..bbfd102 100644 --- a/src/utils/bamtools_pileup_engine.h +++ b/src/utils/bamtools_pileup_engine.h @@ -91,4 +91,4 @@ class PileupEngine { } // namespace BamTools -#endif // BAMTOOLS_PILEUP_ENGINE_H \ No newline at end of file +#endif // BAMTOOLS_PILEUP_ENGINE_H -- 2.39.2