From 3eb62cf4488c354e6e0dc033c3cacc9f3a5fb941 Mon Sep 17 00:00:00 2001 From: Heng Li Date: Mon, 18 May 2009 20:01:23 +0000 Subject: [PATCH] Added a note to the manual. Currently SAMtools used unaligned words in several places. Although this does not cause bus errors to me, it may affect portability. Please see the "Bus error" wiki page for more information. Also thank James Bonfields for pointing this out. --- samtools.1 | 2 +- 1 file changed, 1 insertion(+), 1 deletion(-) diff --git a/samtools.1 b/samtools.1 index acd27bc..802e7a5 100644 --- a/samtools.1 +++ b/samtools.1 @@ -319,7 +319,7 @@ _ .SH LIMITATIONS .PP .IP o 2 -Reference sequence names and lengths are not acquired from the BAM/SAM header. +Unaligned words used in bam_import.c, bam_endian.h, bam.c and bam_aux.c. .IP o 2 CIGAR operation P is not properly handled at the moment. .IP o 2 -- 2.39.2