From 37a8910b7465c8e6aeb2c8211f083f0a40ea2380 Mon Sep 17 00:00:00 2001
From: martinahansen <martinahansen@74ccb610-7750-0410-82ae-013aeee3265d>
Date: Thu, 24 May 2012 13:09:11 +0000
Subject: [PATCH] moving digest.rb

git-svn-id: http://biopieces.googlecode.com/svn/trunk@1825 74ccb610-7750-0410-82ae-013aeee3265d
---
 code_ruby/lib/maasha/seq.rb                    | 2 +-
 code_ruby/lib/maasha/{ => seq}/digest.rb       | 0
 code_ruby/lib/maasha/seq/trim.rb               | 1 +
 code_ruby/test/maasha/{ => seq}/test_digest.rb | 0
 4 files changed, 2 insertions(+), 1 deletion(-)
 rename code_ruby/lib/maasha/{ => seq}/digest.rb (100%)
 rename code_ruby/test/maasha/{ => seq}/test_digest.rb (100%)

diff --git a/code_ruby/lib/maasha/seq.rb b/code_ruby/lib/maasha/seq.rb
index 0dcccba..b45540b 100644
--- a/code_ruby/lib/maasha/seq.rb
+++ b/code_ruby/lib/maasha/seq.rb
@@ -25,7 +25,7 @@
 require 'maasha/patternmatcher'
 require 'maasha/bits'
 require 'maasha/backtrack'
-require 'maasha/digest'
+require 'maasha/seq/digest'
 require 'maasha/seq/trim'
 require 'narray'
 #require 'maasha/patscan'
diff --git a/code_ruby/lib/maasha/digest.rb b/code_ruby/lib/maasha/seq/digest.rb
similarity index 100%
rename from code_ruby/lib/maasha/digest.rb
rename to code_ruby/lib/maasha/seq/digest.rb
diff --git a/code_ruby/lib/maasha/seq/trim.rb b/code_ruby/lib/maasha/seq/trim.rb
index a322dc9..ad8c693 100644
--- a/code_ruby/lib/maasha/seq/trim.rb
+++ b/code_ruby/lib/maasha/seq/trim.rb
@@ -23,6 +23,7 @@
 
 require 'inline'
 
+# Error class for all exceptions to do with Trim.
 class TrimError < StandardError; end
 
 # Module containing methods for end trimming sequences with suboptimal quality
diff --git a/code_ruby/test/maasha/test_digest.rb b/code_ruby/test/maasha/seq/test_digest.rb
similarity index 100%
rename from code_ruby/test/maasha/test_digest.rb
rename to code_ruby/test/maasha/seq/test_digest.rb
-- 
2.39.2