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adding bzip2 support in ruby
[biopieces.git] / code_perl / Maasha / UCSC /
2013-03-16 martinahansenchanged upper/lower case output in assemble_pairs tree | commitdiff
2012-04-30 martinahansenupgraded write_fixedstep tree | commitdiff
2010-06-17 martinahansenadded fixedstep biopieces tree | commitdiff
2010-06-16 martinahansenschrubbing UCSC.pm code tree | commitdiff
2010-05-11 martinahansenfixed bug in write_fixedstep tree | commitdiff
2009-09-21 martinahansencleaned up calc_fixedstep tree | commitdiff
2009-09-09 martinahansenfixed bug in psl2bed conversion tree | commitdiff
2009-09-09 martinahansenadded BED entry output to check_bed tree | commitdiff
2009-07-23 martinahansenfixed bowtie_seq tree | commitdiff
2009-07-21 martinahansenfixed bowtie_seq tree | commitdiff
2009-07-08 martinahansenuse warnings added to perl modules tree | commitdiff
2009-06-17 martinahansenfixed a number of bugs in PSL tree | commitdiff
2009-06-02 martinahansen3 more again tree | commitdiff
2009-05-26 martinahansenmigrated and fixed calc_fixedstep tree | commitdiff
2009-05-25 martinahansenmigrated blat_seq tree | commitdiff
2009-05-24 martinahansenmigrated assemble_tag_contigs tree | commitdiff
2008-12-17 martinahansenfixed BED BUG tree | commitdiff
2008-12-11 martinahansenlots of PSL related changes tree | commitdiff
2008-12-11 martinahansenadded exon capabilities to calc_fixedstep tree | commitdiff
2008-12-11 martinahansencalc_fixedstep reverted to perl tree | commitdiff
2008-12-08 martinahansenadded --check to a number of Biopieces tree | commitdiff
2008-12-08 martinahansenreverting to BED lists tree | commitdiff
2008-12-08 martinahansenchanged BED.pm from list to hash tree | commitdiff
2008-12-08 martinahansenmade check_bed optional tree | commitdiff
2008-12-05 martinahansenfixed CHR_BEG=0 bug tree | commitdiff
2008-12-05 martinahansenadded bed2tag_contigs as backend to assemble_tag_contigs tree | commitdiff
2008-12-04 martinahansenadded python code tree | commitdiff
2008-11-27 martinahansenadded c power to calc_fixedstep tree | commitdiff
2008-11-24 martinahansenfixed bugs in calc_fixedstep tree | commitdiff
2008-11-24 martinahansenfixed bugs in assemble_tag_contigs tree | commitdiff
2008-11-24 martinahansenmajor code upgrade 1 tree | commitdiff
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