From: mikaels <mikaels@9efb377e-2e27-44b9-b91a-ec4abb80ed8b>
Date: Sat, 11 Apr 2009 03:45:55 +0000 (+0000)
Subject: Fixed some of the output for tag data.
X-Git-Url: https://git.donarmstrong.com/?a=commitdiff_plain;h=a7ada45ca6f4761f5c03fe6a0bf90afd142dd14b;p=bamtools.git

Fixed some of the output for tag data.

git-svn-id: svn+ssh://gene.bc.edu/home/subversion/Derek/BamTools/trunk@13 9efb377e-2e27-44b9-b91a-ec4abb80ed8b
---

diff --git a/BamReaderMain.cpp b/BamReaderMain.cpp
index c3510e0..5426763 100644
--- a/BamReaderMain.cpp
+++ b/BamReaderMain.cpp
@@ -149,11 +149,12 @@ int main(int argc, char* argv[]) {
 					cout << "Type: " << (*cigarIter).Type << "\tLength: " << (*cigarIter).Length << endl;
 				}
 
-				cout << "Tags: " << endl;
-				vector<string>::const_iterator tagIter = bAlignment.Tags.begin();
-				vector<string>::const_iterator tagEnd  = bAlignment.Tags.end();
-				for ( ; tagIter != tagEnd; ++tagIter ) {
-					cout << (*tagIter) << endl;
+				if(!bAlignment.TagData.empty()) {
+				  cout << "Tag data is present." << endl;
+				  string readGroup;
+				  if(bAlignment.GetReadGroup(readGroup)) {
+				    cout << "- read group: " << readGroup << endl;
+				  }
 				}
 			}
 		}