From: Michael Hanke Date: Fri, 13 May 2011 19:09:07 +0000 (-0400) Subject: Move survey into separate dir, add makefile X-Git-Url: https://git.donarmstrong.com/?a=commitdiff_plain;h=a2423efe556b5d936c2ff4c359d03f48fe9812e8;p=neurodebian.git Move survey into separate dir, add makefile but don't build with the rest of the page. --- diff --git a/sandbox/select_country.inc b/sandbox/select_country.inc deleted file mode 100644 index 154ac95..0000000 --- a/sandbox/select_country.inc +++ /dev/null @@ -1,255 +0,0 @@ - diff --git a/sandbox/select_os_options.inc b/sandbox/select_os_options.inc deleted file mode 100644 index 18693d0..0000000 --- a/sandbox/select_os_options.inc +++ /dev/null @@ -1,24 +0,0 @@ - - - - - - - - - - - - - - - - - - - - - - - - diff --git a/sandbox/survey.css b/sandbox/survey.css deleted file mode 100644 index 65e924a..0000000 --- a/sandbox/survey.css +++ /dev/null @@ -1,79 +0,0 @@ -body { - font-family: sans-serif; - font-size: 100%; - background-color: #444; - color: #000; - margin: 1em; -} - -h1.title { - color: #2C471A; - font-size: 150%; - text-align: center; -} - -h1 { - color: #2C471A; - font-size: 120%; -} - -h2 { - color: #2C471A; - font-size: 100%; -} - -div.document { - background-color: #fff; - padding: 1em; -} - -div.rating { - text-align: center; - font-size: 80%; - float: left; - padding: 0.5em; -} - -table.questionaire { - padding: 0px; -} - -tr.oddrow { - background-color: #ddd; -} - -table.questionaire td { - padding: 0px; - margin: 0px; -} - -td.response { - text-align: left; - white-space: nowrap; - background-color: #eeffcc; -} - -tr.oddrow td.response { - background-color: #ccd9af; -} - -td.task { - text-align: left; -} - -th p, -td p { - padding: 0.2em; - margin: 0px; -} - -a { - color: #820430; - text-decoration: none; -} - -a:hover { - text-decoration: underline; -} - - diff --git a/sandbox/survey.rst b/sandbox/survey.rst deleted file mode 100644 index ebeae09..0000000 --- a/sandbox/survey.rst +++ /dev/null @@ -1,945 +0,0 @@ - -Scientific software usage in neuroscience research -================================================== - -This survey should take about five minutes. Immediately after submission you -will be presented with some statistics on previous responses. Please try to -answer as many questions as you can, but don't worry if you cannot answer all -of them. - -.. raw:: html - - - - - -
- - -Personal background -------------------- - -.. raw:: html - - - - - -
- -Which country are you working in? - -.. raw:: html - - - -.. raw:: html - :file: select_country.inc - -.. raw:: html - -
- -Where are you working? - -.. raw:: html - - - -
- -What is your position? - -.. raw:: html - - - -
- -What type of data are you working with? Please check all items that apply. - -.. raw:: html - - -
- Behavioral
- MRI/fMRI/DTI
- EEG/MEG
- 		- PET/SPECT
- Electrophysiology
- Microspectroscopy
- - -
-
- -Are you developing software that is intended to be used by other researchers? - -.. raw:: html - - - Yes - No -
- -Personal scientific software environment ----------------------------------------- - -Here are a few questions about your personal scientific software environment -for research activities like data acquisition, computational modeling, and data -analysis. You might be running this on your laptop, desktop, personal -workstation or any other machine where **you decide** what software you are -using, and you typically also have permission to **install it yourself**. If -you are operating different environments, please describe the one that you find -most productive for your research purposes. If you don't have a machine that -you administer yourself, instead, please indicate what kind of scientific -software environment you would like to be doing your research in. - -.. raw:: html - - - - - -
- -What fraction of your research activity time do you spend in this software -environment as opposed to any other environment that you migh have access to? - -.. raw:: html - - - -
- -What type of hardware are you using? - -.. raw:: html - - - -
- -What operating system is this environment running on? - -.. raw:: html - - - -
- -How much time do you spend each month on maintaining this environment? This -includes the time spent on operating system (security) upgrades, as well as -installing and updating scientific software. - -.. raw:: html - - - hours per month -
- ---------------------------------------------------------------- - -Please indicate how much you agree to the following statements. - -.. raw:: html - - - - - -
- -*I prefer this particular scientific software environment because ...* - -.. raw:: html - -
- -... the developers of an important research software recommend it - -.. raw:: html - - -
Definitely agree
-
Mostly agree
-
Mostly disagree
-
Definitely disagree
-
- - -... of the variety of available research software for this environment - -.. raw:: html - - -
Definitely agree
-
Mostly agree
-
Mostly disagree
-
Definitely disagree
-
- - -... of the availibility of commercial support - -.. raw:: html - - -
Definitely agree
-
Mostly agree
-
Mostly disagree
-
Definitely disagree
-
- - -... many of my colleagues use something similar - -.. raw:: html - - -
Definitely agree
-
Mostly agree
-
Mostly disagree
-
Definitely disagree
-
- - -... it is popular and I can get solutions for problems from web forums and mailing lists - -.. raw:: html - - -
Definitely agree
-
Mostly agree
-
Mostly disagree
-
Definitely disagree
-
- - -... I rely on a particular application that only runs in this environment - -.. raw:: html - - -
Definitely agree
-
Mostly agree
-
Mostly disagree
-
Definitely disagree
-
- - -... it has adequate support for all required hardware - -.. raw:: html - - -
Definitely agree
-
Mostly agree
-
Mostly disagree
-
Definitely disagree
-
- - -... I have the necessary technical skills to maintain this environment myself - -.. raw:: html - - -
Definitely agree
-
Mostly agree
-
Mostly disagree
-
Definitely disagree
-
- - -Managed scientific software environment ---------------------------------------- - -The following questions are about a managed environment of scientific software -that is provided to you to carry out computing and data analysis. Such an -environment is typically managed by **dedicated IT staff**, and **you don't -have permissions to install arbitrary software**. This environment may be -shared by many researchers in a lab, a whole research institution, or even be -publicly accessible. If you have access to multiple environments of this kind, -please describe the one that offers most support for your particular research -purposes. - - -.. raw:: html - - - - - -
- -What fraction of time do you spend in this environment during your research -activities? - -.. raw:: html - - - -
- -What type of hardware is this software environment running on? - -.. raw:: html - - - -
- - -What operating system is this environment running on? - -.. raw:: html - - - -
- ---------------------------------------------------------------- - -How much do you agree to the following statements? - -.. raw:: html - - - - - -
- -This environment provides me with the best available tools for my research - -.. raw:: html - - -
Definitely agree
-
Mostly agree
-
Mostly disagree
-
Definitely disagree
-
- -The support staff solves all my technical problems and addresses my demands in -a timely fashion - -.. raw:: html - - -
Definitely agree
-
Mostly agree
-
Mostly disagree
-
Definitely disagree
-
- -There are always enough licenses for essential commerical software tools - -.. raw:: html - - -
Definitely agree
-
Mostly agree
-
Mostly disagree
-
Definitely disagree
-
- -I need to deploy additional software to be able to perform my research in this environment - -.. raw:: html - - -
Definitely agree
-
Mostly agree
-
Mostly disagree
-
Definitely disagree
-
- - -Using this managed environment is more cost effective than operating a suitable -environment myself - -.. raw:: html - - -
Definitely agree
-
Mostly agree
-
Mostly disagree
-
Definitely disagree
-
- -.. raw:: html - -
- -Virtualization --------------- - -The following questions are about your usage of systems for hardware -virtualization in your research -- so-called **virtual machines**. -Virtualization is a technology that allows running more than one operating -systems on one machine at the same time. - -.. raw:: html - - - - - -
- -How often do you use virtual machines for your research purposes? - -.. raw:: html - - -
(skip the remaining questions of this section if "never")
-
- -Which products for virtualization are you using? - -.. raw:: html - - -
- VMWare
- VirtualBox
- Parallels
- QEMU
- 		- Virtual PC
- Xen
- KVM
- - -
-
- -What **guest operating system** is running inside virtual machine? - -.. raw:: html - - - -
- -What **host operating system** are the virtual machines running on? - -.. raw:: html - - - -
- -What are your reasons for employing virtualization in you research? -Please indicate how much you agree to the following statements - -.. raw:: html - -
- -I can run software that is otherwise incompatible with my system - -.. raw:: html - - -
Definitely agree
-
Mostly agree
-
Mostly disagree
-
Definitely disagree
-
- -I have the ability to easily create a snapshot of my whole analysis environment - -.. raw:: html - - -
Definitely agree
-
Mostly agree
-
Mostly disagree
-
Definitely disagree
-
- - -I can take my complete analysis environment with me and run it on different -machines - -.. raw:: html - - -
Definitely agree
-
Mostly agree
-
Mostly disagree
-
Definitely disagree
-
- -The performance of a virtual machine is sufficient for routine application in my -research - -.. raw:: html - - -
Definitely agree
-
Mostly agree
-
Mostly disagree
-
Definitely disagree
-
- - -Resources for scientific software ---------------------------------- - -Where do you obtain scientific software that you employ in your research? Please -check all items that apply - -.. raw:: html - - - -
- -Directly from vendor or project website - -.. raw:: html - -
- -Retailer - -.. raw:: html - -
- -Comes with the operating system - -.. raw:: html - -
- -`Comprehensive Perl Archive Network (CPAN) `_ - -.. raw:: html - -
- -`Comprehensive R Archive Network (CRAN) `_ - -.. raw:: html - -
- -`Extra Packages for Enterprise Linux (EPEL) `_ - -.. raw:: html - -
- -`Fink `_ - -.. raw:: html - -
- -`FreeBSD ports `_ - -.. raw:: html - -
- -`International neuroinformatics Coordinating Facility (INCF) Research Tools `_ - -.. raw:: html - -
- -`Macports `_ - -.. raw:: html - -
- -`Matlab Central `_ - -.. raw:: html - -
- -`NeuroDebian `_ - -.. raw:: html - -
- -`Neuroimaging Informatics Tools and Resources Clearinghouse (NITRC) `_ - -.. raw:: html - -
- -`Python Package Index (PyPi) `_ - -.. raw:: html - -
- -Python bundles: `Enthought Python `_, `Python(x,y) `_ - -.. raw:: html - -
- -`Sourceforge `_ - -.. raw:: html - -
- -
- -Software selection ------------------- - -Please select all software that you are using in your research. - -Generic computing/scripting/programming environments -~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ - -.. raw:: html - - - - - - - - - - - - - - - - - - - - -
C/C++IDLLISRELMapleMathcadMathematica
MatlabOctavePerlPythonRRuby
ScilabSPSSSCIRunShell scripting
- -Distributed computing - frameworks and controllers -~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ - -.. raw:: html - - - - - - - - -
SGETorque/OpenPBS/MauiCondorGlobusMPI (any)IPython
- -Imaging -~~~~~~~ - -.. raw:: html - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -
3D SlicerAFNIAeskulapAmide
BIRN ToolsBRAINS ToolsBioimage SuiteBrainMap
BrainVISA/AnatomistBrainVoyagerCMTKCaret
ConnectomeViewerDSI StudioDTI-TKDiffusion Toolkit/Trackvis
FSLFijiFreeSurferITK-SNAP
ImageJInvesaliusLONILipsia
MangoMIPAV/JISTMNI toolsMRIcron
MRtrixMatlab MVPA toolboxNiBabel/PyNIfTINiPy/NiTime/DiPy/NiPype
PyMVPARESTSPMV3D
VoxBo
- -Data management -~~~~~~~~~~~~~~~ - -.. raw:: html - - - - -
XNAT/PyXNAT/...Human Imaging Database (HID)
- -Neural systems modeling -~~~~~~~~~~~~~~~~~~~~~~~ - -.. raw:: html - - - - - - - - - - - - -
BrianiqriNVTNEURONNESTGenesisMoosePCSIMPyNNTopographica
- -Electrophysiology, MEG/EEG -~~~~~~~~~~~~~~~~~~~~~~~~~~ - -.. raw:: html - - - - - - - - - - - - - - - - - - - - -
BESABioSigBrainStormChronusEEGLABElekta Neuromag
FieldtripKlustaKwikLORETA/sLORETAMNE suiteNeuroExplorerOpenMEEG
OpenelectrophyRTXIRelacs?Trellis-neuro
- -Brain-computer interface -~~~~~~~~~~~~~~~~~~~~~~~~ - -.. raw:: html - - - - - -
BCI2000OpenVIBEPyff
- -Hardware interface/Data acquisition -~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ - -.. raw:: html - - - - - -
ComediEPICSMX
- -Real-time solutions -~~~~~~~~~~~~~~~~~~~ - -.. raw:: html - - - - - - -
RTAIXenomaiRTLinuxPREEMPT_RT
- -Psychophysics/Experimental control -~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ - -.. raw:: html - - - - - - - - - - - - - -
DMDXE-PrimePresentationPsychoPyPyEPLPsychtoolbox
PsytoolkitOpenSesameVisionEggTscope
- -Other -~~~~~ - -.. raw:: html - - - -
- (comma-separated list)
- ---------------------------------------------------------------- - -Thanks for filling out the questionaire. Upon successful submission you will -be presented with some statistics computed from all previous participants. - -.. raw:: html - - -
-
- - - diff --git a/survey/Makefile b/survey/Makefile new file mode 100644 index 0000000..7db8774 --- /dev/null +++ b/survey/Makefile @@ -0,0 +1,16 @@ +all: index.html + +clean: + -rm *.html *.js + +jquery.form.js: + wget --no-check-certificate http://github.com/malsup/form/raw/master/jquery.form.js + +index.html: + rst2html --link-stylesheet --stylesheet-path=survey.css survey.rst > $@ + +upload: index.html jquery.form.js survey.css + rsync -rvzlhp --delete \ + --exclude=Makefile --exclude='*.inc' --exclude='*.rst' \ + --chmod=Dg+s,g+rw * neurodebian@www.pymvpa.org:/home/www/neuro.debian.net/www/survey/ + diff --git a/survey/select_country.inc b/survey/select_country.inc new file mode 100644 index 0000000..154ac95 --- /dev/null +++ b/survey/select_country.inc @@ -0,0 +1,255 @@ + diff --git a/survey/select_os_options.inc b/survey/select_os_options.inc new file mode 100644 index 0000000..18693d0 --- /dev/null +++ b/survey/select_os_options.inc @@ -0,0 +1,24 @@ + + + + + + + + + + + + + + + + + + + + + + + + diff --git a/survey/survey.css b/survey/survey.css new file mode 100644 index 0000000..65e924a --- /dev/null +++ b/survey/survey.css @@ -0,0 +1,79 @@ +body { + font-family: sans-serif; + font-size: 100%; + background-color: #444; + color: #000; + margin: 1em; +} + +h1.title { + color: #2C471A; + font-size: 150%; + text-align: center; +} + +h1 { + color: #2C471A; + font-size: 120%; +} + +h2 { + color: #2C471A; + font-size: 100%; +} + +div.document { + background-color: #fff; + padding: 1em; +} + +div.rating { + text-align: center; + font-size: 80%; + float: left; + padding: 0.5em; +} + +table.questionaire { + padding: 0px; +} + +tr.oddrow { + background-color: #ddd; +} + +table.questionaire td { + padding: 0px; + margin: 0px; +} + +td.response { + text-align: left; + white-space: nowrap; + background-color: #eeffcc; +} + +tr.oddrow td.response { + background-color: #ccd9af; +} + +td.task { + text-align: left; +} + +th p, +td p { + padding: 0.2em; + margin: 0px; +} + +a { + color: #820430; + text-decoration: none; +} + +a:hover { + text-decoration: underline; +} + + diff --git a/survey/survey.rst b/survey/survey.rst new file mode 100644 index 0000000..3153faf --- /dev/null +++ b/survey/survey.rst @@ -0,0 +1,936 @@ + +Scientific software usage in neuroscience research +================================================== + +This survey should take about five minutes. Immediately after submission you +will be presented with some statistics on previous responses. Please try to +answer as many questions as you can, but don't worry if you cannot answer all +of them. + +.. raw:: html + + + + + +
+ + +Personal background +------------------- + +.. raw:: html + + + + + +
+ +Which country are you working in? + +.. raw:: html + + + +.. raw:: html + :file: select_country.inc + +.. raw:: html + +
+ +Where are you working? + +.. raw:: html + + + +
+ +What is your position? + +.. raw:: html + + + +
+ +What type of data are you working with? Please check all items that apply. + +.. raw:: html + + +
+ Behavioral
+ MRI/fMRI/DTI
+ EEG/MEG
+ 		+ PET/SPECT
+ Electrophysiology
+ Microspectroscopy
+ + +
+
+ +Are you developing software that is intended to be used by other researchers? + +.. raw:: html + + + Yes + No +
+ +Personal scientific software environment +---------------------------------------- + +Here are a few questions about your personal scientific software environment +for research activities like data acquisition, computational modeling, and data +analysis. You might be running this on your laptop, desktop, personal +workstation or any other machine where **you decide** what software you are +using, and you typically also have permission to **install it yourself**. If +you are operating different environments, please describe the one that you find +most productive for your research purposes. If you don't have a machine that +you administer yourself, instead, please indicate what kind of scientific +software environment you would like to be doing your research in. + +.. raw:: html + + + + + +
+ +What fraction of your research activity time do you spend in this software +environment as opposed to any other environment that you migh have access to? + +.. raw:: html + + + +
+ +What type of hardware are you using? + +.. raw:: html + + + +
+ +What operating system is this environment running on? + +.. raw:: html + + + +
+ +How much time do you spend each month on maintaining this environment? This +includes the time spent on operating system (security) upgrades, as well as +installing and updating scientific software. + +.. raw:: html + + + hours per month +
+ +--------------------------------------------------------------- + +Please indicate how much you agree to the following statements. + +.. raw:: html + + + + + +
+ +*I prefer this particular scientific software environment because ...* + +.. raw:: html + +
+ +... the developers of an important research software recommend it + +.. raw:: html + + +
Definitely agree
+
Mostly agree
+
Mostly disagree
+
Definitely disagree
+
+ + +... of the variety of available research software for this environment + +.. raw:: html + + +
Definitely agree
+
Mostly agree
+
Mostly disagree
+
Definitely disagree
+
+ + +... of the availibility of commercial support + +.. raw:: html + + +
Definitely agree
+
Mostly agree
+
Mostly disagree
+
Definitely disagree
+
+ + +... many of my colleagues use something similar + +.. raw:: html + + +
Definitely agree
+
Mostly agree
+
Mostly disagree
+
Definitely disagree
+
+ + +... it is popular and I can get solutions for problems from web forums and mailing lists + +.. raw:: html + + +
Definitely agree
+
Mostly agree
+
Mostly disagree
+
Definitely disagree
+
+ + +... I rely on a particular application that only runs in this environment + +.. raw:: html + + +
Definitely agree
+
Mostly agree
+
Mostly disagree
+
Definitely disagree
+
+ + +... it has adequate support for all required hardware + +.. raw:: html + + +
Definitely agree
+
Mostly agree
+
Mostly disagree
+
Definitely disagree
+
+ + +... I have the necessary technical skills to maintain this environment myself + +.. raw:: html + + +
Definitely agree
+
Mostly agree
+
Mostly disagree
+
Definitely disagree
+
+ + +Managed scientific software environment +--------------------------------------- + +The following questions are about a managed environment of scientific software +that is provided to you to carry out computing and data analysis. Such an +environment is typically managed by **dedicated IT staff**, and **you don't +have permissions to install arbitrary software**. This environment may be +shared by many researchers in a lab, a whole research institution, or even be +publicly accessible. If you have access to multiple environments of this kind, +please describe the one that offers most support for your particular research +purposes. + + +.. raw:: html + + + + + +
+ +What fraction of time do you spend in this environment during your research +activities? + +.. raw:: html + + + +
+ +What type of hardware is this software environment running on? + +.. raw:: html + + + +
+ + +What operating system is this environment running on? + +.. raw:: html + + + +
+ +--------------------------------------------------------------- + +How much do you agree to the following statements? + +.. raw:: html + + + + + +
+ +This environment provides me with the best available tools for my research + +.. raw:: html + + +
Definitely agree
+
Mostly agree
+
Mostly disagree
+
Definitely disagree
+
+ +The support staff solves all my technical problems and addresses my demands in +a timely fashion + +.. raw:: html + + +
Definitely agree
+
Mostly agree
+
Mostly disagree
+
Definitely disagree
+
+ +There are always enough licenses for essential commerical software tools + +.. raw:: html + + +
Definitely agree
+
Mostly agree
+
Mostly disagree
+
Definitely disagree
+
+ +I need to deploy additional software to be able to perform my research in this environment + +.. raw:: html + + +
Definitely agree
+
Mostly agree
+
Mostly disagree
+
Definitely disagree
+
+ + +Using this managed environment is more cost effective than operating a suitable +environment myself + +.. raw:: html + + +
Definitely agree
+
Mostly agree
+
Mostly disagree
+
Definitely disagree
+
+ +.. raw:: html + +
+ +Virtualization +-------------- + +The following questions are about your usage of systems for hardware +virtualization in your research -- so-called **virtual machines**. +Virtualization is a technology that allows running more than one operating +systems on one machine at the same time. + +.. raw:: html + + + + + +
+ +How often do you use virtual machines for your research purposes? + +.. raw:: html + + +
(skip the remaining questions of this section if "never")
+
+ +Which products for virtualization are you using? + +.. raw:: html + + +
+ VMWare
+ VirtualBox
+ Parallels
+ QEMU
+ 		+ Virtual PC
+ Xen
+ KVM
+ + +
+
+ +What **guest operating system** is running inside virtual machine? + +.. raw:: html + + + +
+ +What **host operating system** are the virtual machines running on? + +.. raw:: html + + + +
+ +What are your reasons for employing virtualization in you research? +Please indicate how much you agree to the following statements + +.. raw:: html + +
+ +I can run software that is otherwise incompatible with my system + +.. raw:: html + + +
Definitely agree
+
Mostly agree
+
Mostly disagree
+
Definitely disagree
+
+ +I have the ability to easily create a snapshot of my whole analysis environment + +.. raw:: html + + +
Definitely agree
+
Mostly agree
+
Mostly disagree
+
Definitely disagree
+
+ + +I can take my complete analysis environment with me and run it on different +machines + +.. raw:: html + + +
Definitely agree
+
Mostly agree
+
Mostly disagree
+
Definitely disagree
+
+ +The performance of a virtual machine is sufficient for routine application in my +research + +.. raw:: html + + +
Definitely agree
+
Mostly agree
+
Mostly disagree
+
Definitely disagree
+
+ + +Resources for scientific software +--------------------------------- + +Where do you obtain scientific software that you employ in your research? Please +check all items that apply + +.. raw:: html + + + +
+ +Directly from vendor or project website + +.. raw:: html + +
+ +Retailer + +.. raw:: html + +
+ +Comes with the operating system + +.. raw:: html + +
+ +`Comprehensive Perl Archive Network (CPAN) `_ + +.. raw:: html + +
+ +`Comprehensive R Archive Network (CRAN) `_ + +.. raw:: html + +
+ +`Extra Packages for Enterprise Linux (EPEL) `_ + +.. raw:: html + +
+ +`Fink `_ + +.. raw:: html + +
+ +`FreeBSD ports `_ + +.. raw:: html + +
+ +`International neuroinformatics Coordinating Facility (INCF) Research Tools `_ + +.. raw:: html + +
+ +`Macports `_ + +.. raw:: html + +
+ +`Matlab Central `_ + +.. raw:: html + +
+ +`NeuroDebian `_ + +.. raw:: html + +
+ +`Neuroimaging Informatics Tools and Resources Clearinghouse (NITRC) `_ + +.. raw:: html + +
+ +`Python Package Index (PyPi) `_ + +.. raw:: html + +
+ +Python bundles: `Enthought Python `_, `Python(x,y) `_ + +.. raw:: html + +
+ +`Sourceforge `_ + +.. raw:: html + +
+ +
+ +Software selection +------------------ + +Please select all software that you are using in your research. + +Generic computing/scripting/programming environments +~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ + +.. raw:: html + + + + + + + + + + + + + + + + + + + + +
C/C++IDLLISRELMapleMathcadMathematica
MatlabOctavePerlPythonRRuby
ScilabSPSSSCIRunShell scripting
+ +Distributed computing - frameworks and controllers +~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ + +.. raw:: html + + + + + + + + +
SGETorque/OpenPBS/MauiCondorGlobusMPI (any)IPython
+ +Imaging +~~~~~~~ + +.. raw:: html + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + +
3D SlicerAFNIAeskulapAmide
BIRN ToolsBRAINS ToolsBioimage SuiteBrainMap
BrainVISA/AnatomistBrainVoyagerCMTKCaret
ConnectomeViewerDSI StudioDTI-TKDiffusion Toolkit/Trackvis
FSLFijiFreeSurferITK-SNAP
ImageJInvesaliusLONILipsia
MangoMIPAV/JISTMNI toolsMRIcron
MRtrixMatlab MVPA toolboxNiBabel/PyNIfTINiPy/NiTime/DiPy/NiPype
PyMVPARESTSPMV3D
VoxBo
+ +Data management +~~~~~~~~~~~~~~~ + +.. raw:: html + + + + +
XNAT/PyXNAT/...Human Imaging Database (HID)
+ +Neural systems modeling +~~~~~~~~~~~~~~~~~~~~~~~ + +.. raw:: html + + + + + + + + + + + + +
BrianiqriNVTNEURONNESTGenesisMoosePCSIMPyNNTopographica
+ +Electrophysiology, MEG/EEG +~~~~~~~~~~~~~~~~~~~~~~~~~~ + +.. raw:: html + + + + + + + + + + + + + + + + + + + + +
BESABioSigBrainStormChronusEEGLABElekta Neuromag
FieldtripKlustaKwikLORETA/sLORETAMNE suiteNeuroExplorerOpenMEEG
OpenelectrophyRTXIRelacs?Trellis-neuro
+ +Brain-computer interface +~~~~~~~~~~~~~~~~~~~~~~~~ + +.. raw:: html + + + + + +
BCI2000OpenVIBEPyff
+ +Hardware interface/Data acquisition +~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ + +.. raw:: html + + + + + +
ComediEPICSMX
+ +Real-time solutions +~~~~~~~~~~~~~~~~~~~ + +.. raw:: html + + + + + + +
RTAIXenomaiRTLinuxPREEMPT_RT
+ +Psychophysics/Experimental control +~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ + +.. raw:: html + + + + + + + + + + + + + +
DMDXE-PrimePresentationPsychoPyPyEPLPsychtoolbox
PsytoolkitOpenSesameVisionEggTscope
+ +Other +~~~~~ + +.. raw:: html + + + +
+ (comma-separated list)
+ +--------------------------------------------------------------- + +Thanks for filling out the questionaire. Upon successful submission you will +be presented with some statistics computed from all previous participants. + +.. raw:: html + + +
+
+ + +