From: martinahansen <martinahansen@74ccb610-7750-0410-82ae-013aeee3265d>
Date: Tue, 17 Aug 2010 14:03:22 +0000 (+0000)
Subject: updating test_read_fasta
X-Git-Url: https://git.donarmstrong.com/?a=commitdiff_plain;h=9de2698b678d7abcfd899f08fd78a56e04a1e308;p=biopieces.git

updating test_read_fasta

git-svn-id: http://biopieces.googlecode.com/svn/trunk@1064 74ccb610-7750-0410-82ae-013aeee3265d
---

diff --git a/bp_test/in/read_fasta.in.gz b/bp_test/in/read_fasta.in.gz
new file mode 100644
index 0000000..80c32ee
Binary files /dev/null and b/bp_test/in/read_fasta.in.gz differ
diff --git a/bp_test/out/read_fasta.out.1 b/bp_test/out/read_fasta.out.1
index 845ac01..3337423 100644
--- a/bp_test/out/read_fasta.out.1
+++ b/bp_test/out/read_fasta.out.1
@@ -1,8 +1,8 @@
+SEQ_NAME: test1
 SEQ: ATCG
 SEQ_LEN: 4
-SEQ_NAME: test1
 ---
+SEQ_NAME: test2
 SEQ: atcg
 SEQ_LEN: 4
-SEQ_NAME: test2
 ---
diff --git a/bp_test/out/read_fasta.out.2 b/bp_test/out/read_fasta.out.2
index 79b3251..5246b42 100644
--- a/bp_test/out/read_fasta.out.2
+++ b/bp_test/out/read_fasta.out.2
@@ -1,4 +1,4 @@
+SEQ_NAME: test1
 SEQ: ATCG
 SEQ_LEN: 4
-SEQ_NAME: test1
 ---
diff --git a/bp_test/test/test_read_fasta b/bp_test/test/test_read_fasta
index bff0470..82b220c 100755
--- a/bp_test/test/test_read_fasta
+++ b/bp_test/test/test_read_fasta
@@ -6,6 +6,10 @@ run "$bp -i $in -O $tmp"
 assert_no_diff $tmp $out.1
 clean
 
+run "$bp -i $in.gz -O $tmp"
+assert_no_diff $tmp $out.1
+clean
+
 run "$bp -i $in -n 1 -O $tmp"
 assert_no_diff $tmp $out.2
 clean