From: Heng Li <lh3@live.co.uk>
Date: Wed, 16 Jun 2010 13:03:59 +0000 (+0000)
Subject: fixed a minor bug in indexing
X-Git-Url: https://git.donarmstrong.com/?a=commitdiff_plain;h=7aac24615b94e606ca25955b5368c159f9973e25;p=samtools.git

fixed a minor bug in indexing
---

diff --git a/bam_index.c b/bam_index.c
index 3fa950d..7a53d7f 100644
--- a/bam_index.c
+++ b/bam_index.c
@@ -120,7 +120,7 @@ static void merge_chunks(bam_index_t *idx)
 		index = idx->index[i];
 		for (k = kh_begin(index); k != kh_end(index); ++k) {
 			bam_binlist_t *p;
-			if (!kh_exist(index, k)) continue;
+			if (!kh_exist(index, k) || kh_key(index, k) == BAM_MAX_BIN) continue;
 			p = &kh_value(index, k);
 			m = 0;
 			for (l = 1; l < p->n; ++l) {