From: martinahansen <martinahansen@74ccb610-7750-0410-82ae-013aeee3265d>
Date: Thu, 29 Oct 2009 15:10:11 +0000 (+0000)
Subject: fixed bug in patscan_seq
X-Git-Url: https://git.donarmstrong.com/?a=commitdiff_plain;h=7925e22c90b2de82324131b04376ea9c69617482;p=biopieces.git

fixed bug in patscan_seq

git-svn-id: http://biopieces.googlecode.com/svn/trunk@721 74ccb610-7750-0410-82ae-013aeee3265d
---

diff --git a/bp_bin/patscan_seq b/bp_bin/patscan_seq
index 2d828f6..28cb585 100755
--- a/bp_bin/patscan_seq
+++ b/bp_bin/patscan_seq
@@ -82,7 +82,7 @@ else
 
     while ( $record = Maasha::Biopieces::get_record( $in ) ) 
     {
-        if ( $entry = Maasha::Biopieces::biopiece2fasta( $record ) )
+        if ( $entry = Maasha::Fasta::biopiece2fasta( $record ) )
         {
             $type = Maasha::Seq::seq_guess_type( $record->{ "SEQ" } ) if not $type;