From: barnett <barnett@9efb377e-2e27-44b9-b91a-ec4abb80ed8b>
Date: Mon, 13 Apr 2009 15:17:17 +0000 (+0000)
Subject: Chip - removed limits
X-Git-Url: https://git.donarmstrong.com/?a=commitdiff_plain;h=53d2efeb9a92d7892fc7bd4b2f62ee5779397a6a;p=bamtools.git

Chip - removed limits

git-svn-id: svn+ssh://gene.bc.edu/home/subversion/Derek/BamTools/trunk@15 9efb377e-2e27-44b9-b91a-ec4abb80ed8b
---

diff --git a/BamMerge.cpp b/BamMerge.cpp
index 43dc821..7f43833 100644
--- a/BamMerge.cpp
+++ b/BamMerge.cpp
@@ -151,7 +151,7 @@ int main(int argc, char* argv[]) {
 	BamAlignment ba;
 	
 	unsigned int ac1 = 0;
-	while(reader1.GetNextAlignment(ba) && ac1 < 400) {
+	while(reader1.GetNextAlignment(ba)) {
 	  writer.SaveAlignment(ba);
 	  ac1++;
 	}
@@ -165,7 +165,7 @@ int main(int argc, char* argv[]) {
 	//   assign re-coded refId
 	//   write alignment
 	int ac2 = 0;
-	while(reader2.GetNextAlignment(ba) && ac2 < 400) {
+	while(reader2.GetNextAlignment(ba) ) {
 	  ac2++;
 
 	  // retrieve original refId