From: martinahansen <martinahansen@74ccb610-7750-0410-82ae-013aeee3265d>
Date: Tue, 24 May 2011 12:36:45 +0000 (+0000)
Subject: fixed strange bug in find_adaptor
X-Git-Url: https://git.donarmstrong.com/?a=commitdiff_plain;h=50bb4c0c9c26a71fecd462647172a066e2d05f66;p=biopieces.git

fixed strange bug in find_adaptor

git-svn-id: http://biopieces.googlecode.com/svn/trunk@1423 74ccb610-7750-0410-82ae-013aeee3265d
---

diff --git a/bp_bin/find_adaptor b/bp_bin/find_adaptor
index 9ada12c..5379309 100755
--- a/bp_bin/find_adaptor
+++ b/bp_bin/find_adaptor
@@ -63,7 +63,7 @@ class PatScan
     matches = {}
 
     Fasta.open(@file_patscan, mode='r') do |ios|
-      ios.each_entry do |entry|
+      ios.each do |entry|
         if entry.seq_name =~ /^(\d+):\[(\d+),(\d+)\]$/
           name  = $1.to_i
           start = $2.to_i - 1