From: Yaroslav Halchenko Date: Mon, 22 Nov 2010 20:23:33 +0000 (-0500) Subject: Added future/blends task files for relevant pkgs: just use ../../tools/blends-inject... X-Git-Url: https://git.donarmstrong.com/?a=commitdiff_plain;h=4c372e09bde5c290c6c4b9937e458d2139a9dcaf;p=neurodebian.git Added future/blends task files for relevant pkgs: just use ../../tools/blends-inject -v 5 * --- diff --git a/future/blends/neurodata b/future/blends/neurodata new file mode 100644 index 0000000..f5694b0 --- /dev/null +++ b/future/blends/neurodata @@ -0,0 +1,11 @@ +Source: neurodata +Tasks: debian-science/neuroscience-electrophysiology + +Homepage: http://sourceforge.net/projects/neurodata/ +Language: C++, Octave/Matlab, Perl +Author: Bayle Shanks +License: GPL-2+ +Pkg-Description: suite to analyze data acquired from electrophysiology experiments + Currently, neurodata has an Octave/MATLAB program to analyze + electroneurogram traces of coupled oscillators, and a Perl library + for the analysis of voltage trace data. diff --git a/future/blends/qrtailab b/future/blends/qrtailab new file mode 100644 index 0000000..8485f81 --- /dev/null +++ b/future/blends/qrtailab @@ -0,0 +1,11 @@ +Source: qrtailab +Tasks: debian-science/neuroscience-electrophysiology +Homepage: http://qrtailab.sourceforge.net/ +Author: Holger Nahrstaedt +License: LGPL-2 +Why: Useful and used in acquisition/analysis setups +Pkg-Description: Qt-GUI for RTAI + QRtaiLab is a QT-based port of the software scope xrtailab of the + RTAI project. It can be used as virtual oscilloscope and monitoring + application for interacting with the real-time external. +Version: 0.1.12 diff --git a/future/blends/spike b/future/blends/spike new file mode 100644 index 0000000..b8b939e --- /dev/null +++ b/future/blends/spike @@ -0,0 +1,16 @@ +Source: spike +Tasks: debian-science/neuroscience-electrophysiology + +Language: C++, Octave/Matlab +License: BSD-3 and Academic Free License +Responsible: NeuroDebian Team +Homepage: http://neuroanalysis.org +Published-Title: Spike Train Analysis Toolkit: Enabling Wider Application of Information-Theoretic Techniques to Neurophysiology +Published-Authors: David H. Goldberg, Jonathan D. Victor, Esther P. Gardner, and Daniel Gardner +Published-In: Neuroinformatics, 7, 165–178 +Published-Year: 2009 +Published-DOI: 10.1007/s12021-009-9049-y +Pkg-Description: spike train analysis toolbox + This toolbox implements several information-theoretic spike train analysis + techniques. This implementation behaves like a typical MATLAB toolbox, but + the underlying computations are coded in C and optimized for efficiency. diff --git a/future/blends/stimfit b/future/blends/stimfit new file mode 100644 index 0000000..84b640f --- /dev/null +++ b/future/blends/stimfit @@ -0,0 +1,19 @@ +Source: stimfit +Tasks: debian-science/neuroscience-electrophysiology +Homepage: http://code.google.com/p/stimfit/ +Version: 0.10.0 +Author: Christoph Schmidt-Hieber +License: GPL-2 +Pkg-Description: viewing and analyzing of electrophysiological data + Stimfit is a free, fast and simple program for viewing and analyzing + electrophysiological data. It features an embedded Python shell that + allows you to extend the program functionality by using numerical + libraries such as NumPy and SciPy. + . + It includes stfio module which supports some electrophysiological + file formats: + - Read/write: CFS binary data, HDF5 files, Axon text files, + ASCII files + - Read-only: Axon binary files (*.abf), Axograph files (*.axgd, + *.axgx), HEKA files (*.dat, from version 0.10) + * Write-only: Igor binary waves (*.ibw) diff --git a/future/blends/trellis-neuro b/future/blends/trellis-neuro new file mode 100644 index 0000000..75c9099 --- /dev/null +++ b/future/blends/trellis-neuro @@ -0,0 +1,11 @@ +Source: trellis-neuro +Tasks: debian-science/neuroscience-electrophysiology +Homepage: http://sourceforge.net/projects/trellis-neuro/ +License: GPL-3+ and LGPL-3+ +Author: Ripple, LLC +Language: C, C++ +Pkg-Description: interface to neurophysiology data acquisition and stimulation instruments + Trellis-Neuro is an Open Source, multi-platform application suite for + interfacing with neurophysiology data acquisition and stimulation + instruments. It is based on the eXtensible Instrument Processing + Protocol (XIPP), QT 4, and C/C++.