From: martinahansen <martinahansen@74ccb610-7750-0410-82ae-013aeee3265d>
Date: Thu, 17 Nov 2011 10:59:54 +0000 (+0000)
Subject: fixed stupid windows \r bug in Patscan::read_patterns
X-Git-Url: https://git.donarmstrong.com/?a=commitdiff_plain;h=470f9b942318450c351a5a9ea676b1e3207ba3dc;p=biopieces.git

fixed stupid windows \r bug in Patscan::read_patterns

git-svn-id: http://biopieces.googlecode.com/svn/trunk@1657 74ccb610-7750-0410-82ae-013aeee3265d
---

diff --git a/code_perl/Maasha/Patscan.pm b/code_perl/Maasha/Patscan.pm
index 1729488..6de7368 100644
--- a/code_perl/Maasha/Patscan.pm
+++ b/code_perl/Maasha/Patscan.pm
@@ -59,7 +59,7 @@ sub read_patterns
 
     while ( $line = <$fh> )
     {
-        chomp $line;
+        $line =~ s/\r\n//g;
 
         next if $line eq "";