From: martinahansen <martinahansen@74ccb610-7750-0410-82ae-013aeee3265d>
Date: Thu, 27 Sep 2012 12:40:13 +0000 (+0000)
Subject: finishing work on match.rb
X-Git-Url: https://git.donarmstrong.com/?a=commitdiff_plain;h=36204ec2645fc6d700eb846b992e8f7d0a6d347e;p=biopieces.git

finishing work on match.rb

git-svn-id: http://biopieces.googlecode.com/svn/trunk@1943 74ccb610-7750-0410-82ae-013aeee3265d
---

diff --git a/code_ruby/lib/maasha/align/match.rb b/code_ruby/lib/maasha/align/match.rb
index c17ec7f..b137711 100644
--- a/code_ruby/lib/maasha/align/match.rb
+++ b/code_ruby/lib/maasha/align/match.rb
@@ -22,7 +22,11 @@
 
 # >>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>><<<<<<<<<<<<<<<<<<<<<<<<<<<<<<<<<<<<<<<<<<<<
 
+# Class containing methods for located all Maximally Extended Matches (MEMs) between
+# two strings.
 class Matches
+  # Class method to located all MEMs bewteen two sequences within a given search
+  # space and seed with kmers of a given size.
   def self.find(q_seq, s_seq, q_min, s_min, q_max, s_max, kmer)
     m = self.new
     m.matches_find(q_seq, s_seq, q_min, s_min, q_max, s_max, kmer)