From: martinahansen <martinahansen@74ccb610-7750-0410-82ae-013aeee3265d>
Date: Fri, 6 May 2011 06:31:11 +0000 (+0000)
Subject: removing sequence file from assemble_seq*
X-Git-Url: https://git.donarmstrong.com/?a=commitdiff_plain;h=0549ff0cda733c78853ec9039fa2b956b9f6a10b;p=biopieces.git

removing sequence file from assemble_seq*

git-svn-id: http://biopieces.googlecode.com/svn/trunk@1376 74ccb610-7750-0410-82ae-013aeee3265d
---

diff --git a/bp_bin/assemble_seq_idba b/bp_bin/assemble_seq_idba
index 31a1e68..43434e3 100755
--- a/bp_bin/assemble_seq_idba
+++ b/bp_bin/assemble_seq_idba
@@ -91,6 +91,7 @@ unless File.size(file_fasta) == 0
   end
 end
 
+FileUtils.remove_entry_secure file_fasta
 FileUtils.remove_entry_secure options[:directory] if options[:clean]
 
 
diff --git a/bp_bin/assemble_seq_velvet b/bp_bin/assemble_seq_velvet
index b2dfaf8..85c5fa8 100755
--- a/bp_bin/assemble_seq_velvet
+++ b/bp_bin/assemble_seq_velvet
@@ -181,6 +181,7 @@ unless File.size(file_fasta) == 0
   end
 end
 
+FileUtils.remove_entry_secure file_fasta
 FileUtils.remove_entry_secure options[:directory] if options[:clean]