From: martinahansen <martinahansen@74ccb610-7750-0410-82ae-013aeee3265d>
Date: Wed, 6 Feb 2013 14:23:13 +0000 (+0000)
Subject: disable validity check
X-Git-Url: https://git.donarmstrong.com/?a=commitdiff_plain;ds=sidebyside;h=32a9953ec9526fd800a1d564f9bc7c70965689d6;p=biopieces.git

disable validity check

git-svn-id: http://biopieces.googlecode.com/svn/trunk@2090 74ccb610-7750-0410-82ae-013aeee3265d
---

diff --git a/bp_bin/read_fastq b/bp_bin/read_fastq
index 494797c..44a69ed 100755
--- a/bp_bin/read_fastq
+++ b/bp_bin/read_fastq
@@ -66,7 +66,7 @@ Biopieces.open(options[:stream_in], options[:stream_out]) do |input, output|
               raise SeqError, "Could not auto-detect quality score encoding"
             end
           elsif first
-            raise SeqError, "Quality score outside valid range" unless entry.qual_valid?(encoding)
+            #raise SeqError, "Quality score outside valid range" unless entry.qual_valid?(encoding)
             first = false
           end