if (c->tid >= 0) {
recalculated_bin = bam_reg2bin(c->pos, bam_calend(c, bam1_cigar(b)));
if (c->bin != recalculated_bin) {
- fprintf(stderr, "[bam_index_core] read '%s' mapped at POS %d has BIN %d but should be %d\n",
- bam1_qname(b), c->pos + 1, c->bin, recalculated_bin);
+ fprintf(stderr, "[bam_index_core] read '%s' mapped at POS %d to %d has BIN %d but should be %d\n",
+ bam1_qname(b), c->pos + 1, bam_calend(c, bam1_cigar(b)), c->bin, recalculated_bin);
fprintf(stderr, "[bam_index_core] Fix it by using BAM->SAM->BAM to force a recalculation of the BIN field\n");
return NULL;
}