#+AUTHOR: Don Armstrong
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* Education
-** UC Riverside
+** University of California, Riverside
+ *PhD* in Cell, Molecular and Developmental Biology
+ *BS* in Biology
* Skills
** Programming Languages
- + [[http://r-project.org][R]], [[http://www.perl.org][Perl]], sh (bash, POSIX, and zsh), SQL, C/C++, HTML, CSS,
+ + [[http://r-project.org][R]], [[http://www.perl.org][Perl]], sh (bash, POSIX, and zsh), SQL, PL/SQL, C/C++, HTML, CSS,
javascript
** Applications and Daemons
+ Web Infrastructure: apache, ngix, varnish
+ Monitoring: munin, nagios
+ Issue Tracking: Debbugs, Request Tracker, Trac
+ HPC: torque, OpenMPI, slurm
-+ Collaborative Development: git, travis, continuous integration,
- automated testing
+ + Statistics: R, SAS
+ Office Software: Gnumeric, Libreoffice, \LaTeX, Word, Excel,
Powerpoint
** Networking
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* Experience
+** Debian Developer
++ 2004--Present. \emph{Debian Project}, Developer; Technical Committee
+ Member (2010--2016), Technical Committee Chair (2015--2016).
+** Independent Systems Administrator
++ 2004--Present. Developing and designing software and hardware
+ requirements. Deploying and maintaining enterprise-level systems for
+ web, email, and data storage backends using MySQL and other
+ solutions.
** Research Scientist at UIUC
+ 2015--Present. University of Illinois at Urbana-Champaign. Epigenetic
modifications associated with PTSD, the genomic basis of the
development of parturition in mammals, and detecting adverse
pregnancy outcomes using urinary exosomes.
** Postdoctoral Researcher at USC
-+ 2013--2015. Identifying genes and causal alleles associated with
- Systemic Lupus Erythematosus using genome-wide association,
- next-generation sequencing, computational and biochemical
- approaches.
++ 2013--2015. Developing and deploying systems to identify clinically
+ relevant genes and causal alleles associated with Systemic Lupus
+ Erythematosus using genome-wide association, next-generation
+ sequencing, computational and biochemical approaches.
** Postdoctoral Researcher at UCR
+ 2010--2012. Identifying genes which are associated with Systemic
Lupus Erythematosus using prior information and targeted trio-based
studies.
-** Debian Developer
-+ 2004--Present. \emph{Debian Project}, Developer; Technical Committee
- Member (2010--2016), Technical Committee Chair (2015--2016).
* Authored Software
+ *[[http://bugs.debian.org][Debbugs]]*: Bug tracking software for the Debian GNU/Linux
distribution. [[https://bugs.debian.org]]
* Publications and Presentations
+ 24 peer-reviewed publications cited over 1800 times:
https://dla2.us/pubs
-+ Publication record in GWAS, expression analysis of microarrays, SLE,
- GBM, epigenetics, comparative evolution of mammals, and lipid
- membranes
+ H index of 11
+ Multiple presentations on EWAS of PTSD, genetics of SLE, and Open
Source: https://dla2.us/pres