\begin{description}[nolistsep,leftmargin=1pc,style=nextline]
\item[Install on a hard-drive] \url{http://www.debian.org/distrib/}
\item[Live CD/DVD] \url{http://www.debian.org/CD/live/}
-\item[Run in a Virtual Machine] \url{http://neuro.debian.net/vm.html}
+%\item[Run in a Virtual Machine] \url{http://neuro.debian.net/vm.html}
\item[Development version] \url{http://www.debian.org/devel/debian-installer}
\item[Use in a cloud] \url{https://wiki.debian.org/Cloud}
+ \item[Docker: \texttt{docker pull debian}]
\end{description}
% \ndsubsection{Get \emph{Testing/Unstable} Debian}
to submit bug reports and are notified when and why the bug was closed. This
system allows Debian to respond to problems quickly and honestly.
+%\rotatebox{90}{\paragraph{Distribution Development Process}}
+\rotatebox{90}{\includegraphics[height=.9\columnwidth]{distro-dev}}
-
\ndsection{Acknowledgements}
-
- This flyer was adapted from the neuro debian project. You can find
- source code for it here:
- \url{git://anonscm.debian.org/pkg-exppsy/neurodebian.git}
- %\end{comment}
+ \end{comment}
\end{multicols}
--
- % \pagebreak
- % %%
- % %% NeuroDEBIAN
- % %%
- % \begin{multicols}{3} % 3 columns
- %
- % \section*{The Universal Research Platform}
- % \begin{center}
- % \includegraphics[width=\columnwidth]{logo_tuned/label}
- % \url{http://neuro.debian.net}
- % %\ndsection{NeuroDebian Project:}
- % % \hrule
- % \end{center}
- %
- % \ndsection{NeuroDebian is}
- %
- % a Debian project that provides the Neuroscience community with a
- % stable and versatile research platform -- the Debian operating system.
- % Since 2005, \mbox{NeuroDebian} integrates neuroscience software into Debian
- % to allow neuroscientists to benefit from the advantages of
- % the universal operating system in their day-to-day research activities.
- % The NeuroDebian repository
- % (\url{http://neuro.debian.net}) offers the latest research software for
- % all Debian suites (and various releases of Ubuntu).
- % The combination of a stable generic
- % operating system, Debian, and a variety of conveniently accessible research
- % software creates a versatile research platform for neuroscience that offers the
- % latest methodologies of the field to everyone, for free.
- % These advantages make NeuroDebian increasingly popular among
- % neuroscientists and scientific software developers.
- %
- % \vspace{2em}
- %
- % \ndsubsection{NeuroDebian is NOT}
- %
- % yet another Debian GNU/Linux derivative distribution. All work done
- % by the NeuroDebian project targets the official Debian operating system. This
- % approach helps to increase the longevity of the project by relying on the
- % efforts of thousands of Debian contributors.
- %
- % \vspace{3em}
- % \columnbreak
- %
- % \ndsubsection{Software at your fingertips}
- % \begin{flushright}
- % \vspace{-0.5em}
- % \url{http://neuro.debian.net/pkgs.html}
- % \vspace{-0.1em}
- % \end{flushright}
- % \textit{Distributed computing:} Condor, DMTCP, IPython, \ldots \\
- % \textit{Electrophysiology:} BioSig, EEGLAB, Sigviewer, \ldots\\
- % \textit{Machine Learning:} MDP, PyMVPA, sklearn, \ldots\\
- % \textit{Neural Modeling:} Brian, CNrun, PyNN, XPPAUT, \ldots\\
- % \textit{Imaging:} AFNI, FSL, Mricron, NiPy, SPM, \ldots\\
- % \textit{Psychophysics:} PsychoPy, Psychtoolbox, PyEPL, \ldots\\
- % \vspace{-0.8em}
- %
- % % TODO: Environments... -- list avail cloud env using NeuroDebian
- %
- % \ndsubsection{Benefits from Debian integration}
- %
- % \begin{itemize}[nolistsep,leftmargin=1pc]
- %
- % % rephrase to outline the benefit, not burden
- % \item Debian standards and policies guarantee quality and robustness.
- %
- % \item Debian's centralized bug tracking system provides a unified
- % single-point of entry for bug reporting and troubleshooting
- % for any software in Debian.
- %
- % \item Debian makes software available through a world-wide distribution
- % network, thus offloading bandwidth demands.
- %
- % \item Other Debian contributors handle large-scale aspects of
- % deployment, quality assurance, porting and integration at the level
- % of the entire distribution:
- %
- % \begin{description}[nolistsep,leftmargin=1pc]
- % \item[Porting] Software sources get built for 11 hardware
- % architectures and 3 kernels (Linux, HURD, kFreeBSD). Porter teams
- % maintain build infrastructure and help make the code
- % platform-agnostic.
- % \item[QA] Whole-archive rebuilds assure robustness of packaging and
- % warn about upcoming problems (core libraries upgrades) beforehand.
- % \item[Internationalization (I18n)] Translator teams help localize
- % software for more than 60 languages.
- % \end{description}
- %
- % \item Neuroscience software becomes a 1st-class citizen within the
- % Debian project, which guarantees its longevity, smooth installation
- % and upgrades.
- %
- % %\item Participation in the Debian community helps to assure Debian's
- % % aptness for the neuroscientific software demands
- %
- % \end{itemize}
- %
- %
- %
- % %\columnbreak
- %
- % \ndsubsection{How to get NeuroDebian}
- %
- % \textit{Debian/Ubuntu:} \url{neuro.debian.net} repository \\
- % \textit{Others:} NeuroDebian Virtual Machine
- %
- % % Here place a left-top corner of OSX with seamless mode
- % \vspace{3mm}
- % \includegraphics[width=\columnwidth]{../shots/mac_vm_mricron}
- %
- % \begin{comment}
- % \ndsubsection{Developers oriented information}
- %
- % %\columnbreak
- %
- % \ndsubsection{Who is using NeuroDebian}
- %
- % \noindent
- % %\includegraphics[width=\columnwidth]{usage_worldmap}
- %
- % buga dugabuga dugabuga dugabuga dugabuga dugabuga dugabuga dugabuga dugabuga dugabuga dugabuga dugabuga dugabuga dugabuga dugabuga dugabuga dugabuga dugabuga dugabuga dugabuga dugabuga duga
- % \end{comment}
- %
- %
- % \def\blank{\hspace{0em}\vspace{-1em}}
- % \columnbreak
- %
- % \ndsubsection{Work-in-progress}
- % \begin{description}[nolistsep,leftmargin=1pc,style=nextline]
- % \item[Increased coverage]
- % \textit{Electrophysiology:} Fieldtrip, Spyke Viewer, \ldots \\
- % \textit{Neural Modeling:} NEURON, (NEST), LFPy, \\
- % \textit{Imaging:} DTI-TK, Freesurfer, XNAT, \ldots
- % % \epigraph{Having FreeSurfer integrated into the Debian operating system by the NeuroDebian team would have enormous benefits for us, and for the thousands of users of FreeSurfer across the world.}{Prof. Bruce Fischl}{Director, Computational Core at Martinos Center at Massachusetts General Hospital, Charlestown, Massachusetts, USA}
- % \item[Improved quality assurance]
- % Extended integration and regression testing
- % \item[Available snapshotting service]
- % % Entire NeuroDebian repository for any given past moment
- % All versions of packages readily available
- % \item[Data as the 1st-class citizen]
- % \url{http://neuro.debian.net/datasets.html}
- % % yoh: see TODO above -- we can say that it is available already
- % %\item[Universal availability]
- % % % \begin{itemize}[nolistsep,leftmargin=1pc,topsep=0em]
- % % % \item Virtual Appliance enhancements
- % % %\item
- % % Cloud computing
- % % %\end{itemize}
- % \end{description}
- %
- %
- % \ndsubsection{Testimonials}
- % \begin{flushright}
- % \vspace{-0.5em}
- % \url{http://neuro.debian.net/testimonials.html}
- % \vspace{-0.5em}
- % \end{flushright}
- %
- % % TODO yoh: This one remains the best summary IMHO. But may be
- % % we would just kick this section out an place Testimonials into References
- % \epigraph{The approach taken with NeuroDebian is plainly the most appropriate
- % approach to software distribution for the dominant platform in brain
- % image analysis, and I have great confidence that this project will be
- % a major asset to the neuroscience community in facilitating the
- % distribution of stable software, improving the reliability and
- % replicability of analyses, and in helping to improve software
- % development practices.}{Prof. Daniel Y. Kimberg}{Director, Data
- % Processing Facility, Center for Functional Neuroimaging, University of
- % Pennsylvania, Philadelphia, USA}
- %
- % \ndsubsection{Acknowledgements}
- %
- % NeuroDebian is grateful to all Debian developers and contributors for
- % developing the Debian operating system, to
- % \href{http://www.incf.org}{INCF} for the support in community outreach
- % and technical collaborations, and to
- % Prof. \href{http://haxbylab.dartmouth.edu}{James V. Haxby}
- % (\href{http://www.dartmouth.edu/~psych}{PBS Department, Dartmouth
- % College}) for his continued support and endless supply of Italian
- % espresso (\url{http://neuro.debian.net/coffeeart.html}).
- %
- %
- % \ndsubsection{References}
- %
- % Halchenko, Y. O. \& Hanke, M. (2012). \href{http://www.frontiersin.org/Neuroinformatics/10.3389/fninf.2012.00022/full}{Open is not enough. Let’s take the next step: An integrated, community-driven computing platform for neuroscience}. Frontiers in Neuroinformatics, 6:22.
- %
- % % TODO: adjust for the new layout
- % \url{http://neuro.debian.net/#publications}
- %
- % %\columnbreak
- % \end{multicols}
-\pagebreak
-%%
-%% NeuroDEBIAN
-%%
-\begin{multicols}{3} % 3 columns
-
-\section*{The Universal Research Platform}
-\begin{center}
-\includegraphics[width=\columnwidth]{logo_tuned/label}
-\url{http://neuro.debian.net}
-%\ndsection{NeuroDebian Project:}
-% \hrule
-\end{center}
-
-\ndsection{NeuroDebian is}
-
-a Debian project that provides the Neuroscience community with a
-stable and versatile research platform -- the Debian operating system.
-Since 2005, \mbox{NeuroDebian} integrates neuroscience software into Debian
-to allow neuroscientists to benefit from the advantages of
-the universal operating system in their day-to-day research activities.
-The NeuroDebian repository
-(\url{http://neuro.debian.net}) offers the latest research software for
-all Debian suites (and various releases of Ubuntu).
-The combination of a stable generic
-operating system, Debian, and a variety of conveniently accessible research
-software creates a versatile research platform for neuroscience that offers the
-latest methodologies of the field to everyone, for free.
-These advantages make NeuroDebian increasingly popular among
-neuroscientists and scientific software developers.
-
-\vspace{2em}
-
-\ndsubsection{NeuroDebian is NOT}
-
-yet another Debian GNU/Linux derivative distribution. All work done
-by the NeuroDebian project targets the official Debian operating system. This
-approach helps to increase the longevity of the project by relying on the
-efforts of thousands of Debian contributors.
-
-\vspace{3em}
-\columnbreak
-
-\ndsubsection{Software at your fingertips}
-\begin{flushright}
-\vspace{-0.5em}
-\url{http://neuro.debian.net/pkgs.html}
-\vspace{-0.1em}
-\end{flushright}
-\textit{Distributed computing:} Condor, DMTCP, IPython, \ldots \\
-\textit{Electrophysiology:} BioSig, Neo, Sigviewer, \ldots\\
-\textit{Machine Learning:} MDP, PyMVPA, sklearn, \ldots\\
-\textit{Neural Modeling:} Brian, CNrun, PyNN, XPPAUT \ldots\\
-\textit{Imaging:} AFNI, CMTK, FSL, Mricron, NiPy \ldots\\
-\textit{Psychophysics:} PsychoPy, Psychtoolbox-3, PyEPL \ldots\\
-\vspace{-0.8em}
-
-% TODO: Environments... -- list avail cloud env using NeuroDebian
-
-\ndsubsection{Benefits from Debian integration}
-
-\begin{itemize}[nolistsep,leftmargin=1pc]
-
-% rephrase to outline the benefit, not burden
-\item Debian standards and policies guarantee quality.% and robustness.
-
-\item Debian's centralized bug tracking system provides a unified
- single-point of entry for bug reporting and troubleshooting
- for any software in Debian.
-
-\item Debian makes software available through a world-wide distribution
- network, thus offloading bandwidth demands.
-
-\item Other Debian contributors handle large-scale aspects of
- deployment, quality assurance, porting and integration at the level
- of the entire distribution:
-
-\begin{description}[nolistsep,leftmargin=1pc]
-\item[Porting] Software sources get built for 11 hardware
- architectures and 3 kernels (Linux, HURD, kFreeBSD). Porter teams
- maintain build infrastructure and help make the code
- platform-agnostic.
-\item[QA] Whole-archive rebuilds assure robustness of packaging and
- warn about upcoming problems (core libraries upgrades) beforehand.
-\item[Internationalization (I18n)] Translator teams help localize
- software for more than 60 languages.
-\end{description}
-
-\item Neuroscience software becomes a 1st-class citizen within the
- Debian project, which guarantees its longevity, smooth installation
- and upgrades.
-
-%\item Participation in the Debian community helps to assure Debian's
-% aptness for the neuroscientific software demands
-
-\end{itemize}
-
-
-
-%\columnbreak
-
-\ndsubsection{How to get NeuroDebian}
-
-\textit{Debian/Ubuntu:} \url{neuro.debian.net} repository \\
-\textit{Others:} NeuroDebian Virtual Machine
-
-% Here place a left-top corner of OSX with seamless mode
-\vspace{3mm}
-\includegraphics[width=\columnwidth]{../shots/mac_vm_mricron}
-
-\begin{comment}
-\ndsubsection{Developers oriented information}
-
-%\columnbreak
-
-\ndsubsection{Who is using NeuroDebian}
-
-\noindent
-%\includegraphics[width=\columnwidth]{usage_worldmap}
-
-buga dugabuga dugabuga dugabuga dugabuga dugabuga dugabuga dugabuga dugabuga dugabuga dugabuga dugabuga dugabuga dugabuga dugabuga dugabuga dugabuga dugabuga dugabuga dugabuga dugabuga duga
-\end{comment}
-
-
-\def\blank{\hspace{0em}\vspace{-1em}}
-\columnbreak
-
-\ndsubsection{Work-in-progress}
-\begin{description}[nolistsep,leftmargin=1pc,style=nextline]
-\item[Increased coverage]
-\textit{Electrophysiology:} Fieldtrip \\
-\textit{Neural Modeling:} NEURON, (NEST), LFPy \\
-\textit{Imaging:} DTI-TK, Freesurfer, XNAT, \ldots
-% \epigraph{Having FreeSurfer integrated into the Debian operating system by the NeuroDebian team would have enormous benefits for us, and for the thousands of users of FreeSurfer across the world.}{Prof. Bruce Fischl}{Director, Computational Core at Martinos Center at Massachusetts General Hospital, Charlestown, Massachusetts, USA}
-\item[Improved quality assurance]
- Extended integration and regression testing\\
- \url{http://testkraut.readthedocs.org}
-\item[Available snapshotting service]
- % Entire NeuroDebian repository for any given past moment
- All versions of packages readily available
-\item[Data as the 1st-class citizen]
- \url{http://datalad.org} data distribution
-\item[Community knowledge exchange portal]
- \url{http://community.neurodebian.org}
-% yoh: see TODO above -- we can say that it is available already
-%\item[Universal availability]
-% % \begin{itemize}[nolistsep,leftmargin=1pc,topsep=0em]
-% % \item Virtual Appliance enhancements
-% %\item
-% Cloud computing
-% %\end{itemize}
-\end{description}
-
-
-\ndsubsection{Testimonials}
-\begin{flushright}
-\vspace{-0.5em}
-\url{http://neuro.debian.net/testimonials.html}
-\vspace{-0.5em}
-\end{flushright}
-
-% TODO yoh: This one remains the best summary IMHO. But may be
-% we would just kick this section out an place Testimonials into References
-\epigraph{The approach taken with NeuroDebian is plainly the most appropriate
-approach to software distribution for the dominant platform in brain
-image analysis, and I have great confidence that this project will be
-a major asset to the neuroscience community in facilitating the
-distribution of stable software, improving the reliability and
-replicability of analyses, and in helping to improve software
-development practices.}{Prof. Daniel Y. Kimberg}{Director, Data
-Processing Facility, Center for Functional Neuroimaging, University of
-Pennsylvania, Philadelphia, USA}
-
-\ndsubsection{Acknowledgements}
-
-NeuroDebian is grateful to all Debian developers and contributors for
-developing the Debian operating system, to
-\href{http://www.incf.org}{INCF} for the support in community outreach
-and technical collaborations, and to
-Prof. \href{http://haxbylab.dartmouth.edu}{James V. Haxby}
-(\href{http://www.dartmouth.edu/~psych}{PBS Department, Dartmouth
- College}) for his continued support and endless supply of Italian
-espresso (\url{http://neuro.debian.net/coffeeart.html}).
-
-
-\ndsubsection{References}
-
-Halchenko, Y. O. \& Hanke, M. (2012). \href{http://www.frontiersin.org/Neuroinformatics/10.3389/fninf.2012.00022/full}{Open is not enough. Let’s take the next step: An integrated, community-driven computing platform for neuroscience}. Frontiers in Neuroinformatics, 6:22.
-
-% TODO: adjust for the new layout
-\url{http://neuro.debian.net/#publications}
-
-%\columnbreak
-\end{multicols}
--
--
--
\end{document}
projects / neurodebian.git / commitdiff