added roche MID tags to find_mids
authormartinahansen <martinahansen@74ccb610-7750-0410-82ae-013aeee3265d>
Tue, 9 Nov 2010 14:19:25 +0000 (14:19 +0000)
committermartinahansen <martinahansen@74ccb610-7750-0410-82ae-013aeee3265d>
Tue, 9 Nov 2010 14:19:25 +0000 (14:19 +0000)
git-svn-id: http://biopieces.googlecode.com/svn/trunk@1159 74ccb610-7750-0410-82ae-013aeee3265d

bp_bin/find_mids

index c5cf7201f370117048390d03398ef3ba5e9aedc6..26fbbc6991a73cdab66996e2b568f3e59dd470b6 100755 (executable)
@@ -62,9 +62,12 @@ mids = %w{ ACGAGTGCGT ACGCTCGACA AGACGCACTC AGCACTGTAG ATCAGACACG
            CTATGTACAG CTCGATATAG CTCGCACGCG CTGCGTCACG CTGTGCGTCG
            TAGCATACTG TATACATGTG TATCACTCAG TATCTGATAG TCGTGACATG
            TCTGATCGAG TGACATCTCG TGAGCTAGAG TGATAGAGCG TGCGTGTGCG
-           TGCTAGTCAG TGTATCACAG TGTGCGCGTG
+           TGCTAGTCAG TGTATCACAG TGTGCGCGTG ACACGACGAC ACACGTAGTA
+           ACACTACTCG ACGACACGTA ACGAGTAGAC ACGCGTCTAG ACGTACACAC
+           ACGTACTGTG ACGTAGATCG ACTACGTCTC ACTATACGAG ACTCGCGTCG      
 }
 
+
 count_hash = Hash.new { |hash, key| hash[key] = 0 }
 mid_hash   = {}