Chip - removed limits

git-svn-id: svn+ssh://gene.bc.edu/home/subversion/Derek/BamTools/trunk@15 9efb377e-2e27-44b9-b91a-ec4abb80ed8b

diff --git a/BamMerge.cpp b/BamMerge.cpp
index 43dc821cdb7ae5eefafe3118baba27a6651161d9..7f4383348bdc87b6e814ae9285053d396eb2f3ac 100644 (file)
--- a/BamMerge.cpp
+++ b/BamMerge.cpp
@@ -151,7 +151,7 @@ int main(int argc, char* argv[]) {
        BamAlignment ba;\r
        \r
        unsigned int ac1 = 0;\r
-       while(reader1.GetNextAlignment(ba) && ac1 < 400) {\r
+       while(reader1.GetNextAlignment(ba)) {\r
          writer.SaveAlignment(ba);\r
          ac1++;\r
        }\r
@@ -165,7 +165,7 @@ int main(int argc, char* argv[]) {
        //   assign re-coded refId\r
        //   write alignment\r
        int ac2 = 0;\r
-       while(reader2.GetNextAlignment(ba) && ac2 < 400) {\r
+       while(reader2.GetNextAlignment(ba) ) {\r
          ac2++;\r
 \r
          // retrieve original refId\r