-
-Scientific software usage in neuroscience research
-==================================================
-
-This survey should take about five minutes. Immediately after submission you
-will be presented with some statistics on previous responses. Please try to
-answer as many questions as you can, but don't worry if you cannot answer all
-of them.
-
-.. raw:: html
-
- <script type="text/javascript" src="_static/jquery.js"></script>
- <script type="text/javascript" src="_static/jquery.form.js"></script>
-
- <script type="text/javascript">
- // prepare the form when the DOM is ready
- $(document).ready(function() {
- var options = {
- //beforeSubmit: showRequest, // pre-submit callback
- success: showResponse, // post-submit callback
- // other available options:
- url: "/cgi-bin/surveycollector.cgi",
- type: "post",
- dataType: "json",
- clearForm: false,
- resetForm: false
- };
-
- $('#nss_survey').submit(function() {
- $(this).ajaxSubmit(options);
-
- // !!! Important !!!
- // always return false to prevent standard browser submit and page navigation
- return false;
- });
- });
-
- // pre-submit callback
- function showRequest(formData, jqForm, options) {
- var queryString = $.param(formData);
- alert('About to submit: \n\n' + queryString);
- return true;
- }
-
- function showResponse(data, statusText, xhr, $form) {
- // reset form if server reports success
- if (data.success == true) {
- $('#nss_survey').resetForm();
- $('#server_response').html("All good");
- } else {
- $('#server_response').html("");
- alert(data.message);
- }
- }
- </script>
- <form id="nss_survey" action="/cgi-bin/surveycollector.cgi" method="post">
-
-
-Personal background
--------------------
-
-.. raw:: html
-
- <table>
- <tr class="oddrow">
- <td>
-
-Which country are you working in?
-
-.. raw:: html
-
- </td><td class="response">
-
-.. raw:: html
- :file: select_country.inc
-
-.. raw:: html
-
- </td></tr><tr><td>
-
-Where are you working?
-
-.. raw:: html
-
- </td><td class="response">
- <select name="bg_employer" size="1">
- <option value="none" selected="selected" label="Select an option">Select an option</option>
- <option value="edu_priv" label="Higher education (privately funded)">Higher education (privately funded)</option>
- <option value="edu_pub" label="Higher education (publicly funded)">Higher education (publicly funded)</option>
- <option value="research_priv" label="Research institution (privately funded)">Research institution (privately funded)</option>
- <option value="research_pub" label="Research institution (publicly funded)">Research institution (publicly funded)</option>
- <option value="company" label="Company">Company</option>
- </select>
- </td></tr><tr class="oddrow"><td>
-
-What is your position?
-
-.. raw:: html
-
- </td><td class="response">
- <select name="bg_position" size="1">
- <option value="none" selected="selected" label="Select an option">Select an option</option>
- <option value="undergrad" label="Undergraduate student">Undergraduate student</option>
- <option value="graduate" label="PhD student">PhD student</option>
- <option value="postdoc" label="Postdoc">Postdoc</option>
- <option value="professor" label="Professor/Supervisor">Professor/Supervisor</option>
- <option value="ra" label="Research assistant">Research assistant</option>
- <option value="researcher" label="Other researcher">Other researcher</option>
- <option value="sysadmin" label="System administrator">System administrator</option>
- </select>
- </td></tr><tr><td>
-
-What type of data are you working with? Please check all items that apply.
-
-.. raw:: html
-
- </td><td class="response">
- <table><tr><td>
- <input type="checkbox" name="bg_datamod" value="behav" />Behavioral<br />
- <input type="checkbox" name="bg_datamod" value="mri" />MRI/fMRI/DTI<br />
- <input type="checkbox" name="bg_datamod" value="meeg" />EEG/MEG<br />
- </td><td>
- <input type="checkbox" name="bg_datamod" value="pet" />PET/SPECT<br />
- <input type="checkbox" name="bg_datamod" value="ephys" />Electrophysiology<br />
- <input type="checkbox" name="bg_datamod" value="spectro" />Microspectroscopy<br />
- <input type="checkbox" name="bg_datamod" value="other" />
- <input name="bg_datamod_other" type="text" size="20" maxlength="40">
- </td></tr></table>
- </td></tr><tr class="oddrow"><td>
-
-Are you developing software that is intended to be used by other researchers?
-
-.. raw:: html
-
- </td><td class="response">
- <span><input type="radio" name="bg_developer" value="yes" />Yes</span>
- <span><input type="radio" name="bg_developer" value="no" checked="checked" />No</span>
- </td>
- </tr>
- </table>
-
-Personal scientific software environment
-----------------------------------------
-
-Here are a few questions about your personal scientific software environment
-for research activities like data acquisition, computational modeling, and data
-analysis. You might be running this on your laptop, desktop, personal
-workstation or any other machine where **you decide** what software you are
-using, and you typically also have permission to **install it yourself**. If
-you are operating different environments, please describe the one that you find
-most productive for your research purposes. If you don't have a machine that
-you administer yourself, instead, please indicate what kind of scientific
-software environment you would like to be doing your research in.
-
-.. raw:: html
-
- <table>
- <tr class="oddrow">
- <td>
-
-What fraction of your research activity time do you spend in this software
-environment as opposed to any other environment that you migh have access to?
-
-.. raw:: html
-
- </td><td class="response">
- <select name="pers_time" size="1">
- <option value="none" selected="selected" label="Select an option">Select an option</option>
- <option value="notime" label="None/I don't have this environment">None/I don't have this environment</option>
- <option value="little" label="Less then half of the time">Less then half of the time</option>
- <option value="most" label="More than half of the time">More than half of the time</option>
- <option value="always" label="All of the time">All of the time</option>
- </select>
- </td></tr><tr><td>
-
-What type of hardware are you using?
-
-.. raw:: html
-
- </td><td class="response">
- <select name="pers_hardware" size="1">
- <option value="none" selected="selected" label="Select an option">Select an option</option>
- <option value="laptop" label="Laptop/Portable device">Laptop/Portable device</option>
- <option value="desktop" label="Commodity desktop">Commodity desktop</option>
- <option value="workstation" label="High-performance workstation">High-performance workstation</option>
- <option value="cluster" label="Compute cluster">Compute cluster</option>
- <option value="grid" label="Grid/Cloud-computing facility">Grid/Cloud-computing facility</option>
- </select>
- </td></tr><tr class="oddrow"><td>
-
-What operating system is this environment running on?
-
-.. raw:: html
-
- </td><td class="response">
- <select name="pers_os" size="1">
-
-.. raw:: html
- :file: select_os_options.inc
-
-.. raw:: html
-
- </select>
- </td></tr><tr><td>
-
-How much time do you spend each month on maintaining this environment? This
-includes the time spent on operating system (security) upgrades, as well as
-installing and updating scientific software.
-
-.. raw:: html
-
- </td><td class="response">
- <input name="pers_maint_time" type="text" size="3" maxlength="3"> hours per month
- </td>
- </tr>
- </table>
-
----------------------------------------------------------------
-
-Please indicate how much you agree to the following statements.
-
-.. raw:: html
-
- <table>
- <tr><th colspan="2" style="text-align:left;font-weight:normal">
-
-*I prefer this particular scientific software environment because ...*
-
-.. raw:: html
-
- </th></tr><tr class="oddrow">
- <td class="task">
-
-... the developers of an important research software recommend it
-
-.. raw:: html
-
- </td><td class="response">
- <div class="rating">Definitely agree<br /><input type="radio" name="pers_r1" value="3" /></div>
- <div class="rating">Mostly agree<br /><input type="radio" name="pers_r1" value="2" /></div>
- <div class="rating">Mostly disagree<br /><input type="radio" name="pers_r1" value="1" /></div>
- <div class="rating">Definitely disagree<br /><input type="radio" name="pers_r1" value="0" /></div>
- </td></tr><tr><td class="task">
-
-
-... of the variety of available research software for this environment
-
-.. raw:: html
-
- </td><td class="response">
- <div class="rating">Definitely agree<br /><input type="radio" name="pers_r2" value="3" /></div>
- <div class="rating">Mostly agree<br /><input type="radio" name="pers_r2" value="2" /></div>
- <div class="rating">Mostly disagree<br /><input type="radio" name="pers_r2" value="1" /></div>
- <div class="rating">Definitely disagree<br /><input type="radio" name="pers_r2" value="0" /></div>
- </td></tr><tr class="oddrow"><td class="task">
-
-
-... of the availibility of commercial support
-
-.. raw:: html
-
- </td><td class="response">
- <div class="rating">Definitely agree<br /><input type="radio" name="pers_r3" value="3" /></div>
- <div class="rating">Mostly agree<br /><input type="radio" name="pers_r3" value="2" /></div>
- <div class="rating">Mostly disagree<br /><input type="radio" name="pers_r3" value="1" /></div>
- <div class="rating">Definitely disagree<br /><input type="radio" name="pers_r3" value="0" /></div>
- </td></tr><tr><td class="task">
-
-
-... many of my colleagues use something similar
-
-.. raw:: html
-
- </td><td class="response">
- <div class="rating">Definitely agree<br /><input type="radio" name="pers_r4" value="3" /></div>
- <div class="rating">Mostly agree<br /><input type="radio" name="pers_r4" value="2" /></div>
- <div class="rating">Mostly disagree<br /><input type="radio" name="pers_r4" value="1" /></div>
- <div class="rating">Definitely disagree<br /><input type="radio" name="pers_r4" value="0" /></div>
- </td></tr><tr class="oddrow"><td class="task">
-
-
-... it is popular and I can get solutions for problems from web forums and mailing lists
-
-.. raw:: html
-
- </td><td class="response">
- <div class="rating">Definitely agree<br /><input type="radio" name="pers_r5" value="3" /></div>
- <div class="rating">Mostly agree<br /><input type="radio" name="pers_r5" value="2" /></div>
- <div class="rating">Mostly disagree<br /><input type="radio" name="pers_r5" value="1" /></div>
- <div class="rating">Definitely disagree<br /><input type="radio" name="pers_r5" value="0" /></div>
- </td></tr><tr><td class="task">
-
-
-... I rely on a particular application that only runs in this environment
-
-.. raw:: html
-
- </td><td class="response">
- <div class="rating">Definitely agree<br /><input type="radio" name="pers_r6" value="3" /></div>
- <div class="rating">Mostly agree<br /><input type="radio" name="pers_r6" value="2" /></div>
- <div class="rating">Mostly disagree<br /><input type="radio" name="pers_r6" value="1" /></div>
- <div class="rating">Definitely disagree<br /><input type="radio" name="pers_r6" value="0" /></div>
- </td></tr><tr class="oddrow"><td class="task">
-
-
-... it has adequate support for all required hardware
-
-.. raw:: html
-
- </td><td class="response">
- <div class="rating">Definitely agree<br /><input type="radio" name="pers_r7" value="3" /></div>
- <div class="rating">Mostly agree<br /><input type="radio" name="pers_r7" value="2" /></div>
- <div class="rating">Mostly disagree<br /><input type="radio" name="pers_r7" value="1" /></div>
- <div class="rating">Definitely disagree<br /><input type="radio" name="pers_r7" value="0" /></div>
- </td></tr><tr><td class="task">
-
-
-... I have the necessary technical skills to maintain this environment myself
-
-.. raw:: html
-
- </td><td class="response">
- <div class="rating">Definitely agree<br /><input type="radio" name="pers_r8" value="3" /></div>
- <div class="rating">Mostly agree<br /><input type="radio" name="pers_r8" value="2" /></div>
- <div class="rating">Mostly disagree<br /><input type="radio" name="pers_r8" value="1" /></div>
- <div class="rating">Definitely disagree<br /><input type="radio" name="pers_r8" value="0" /></div>
- </td>
- </tr>
- </table>
-
-
-Managed scientific software environment
----------------------------------------
-
-The following questions are about a managed environment of scientific software
-that is provided to you to carry out computing and data analysis. Such an
-environment is typically managed by **dedicated IT staff**, and **you don't
-have permissions to install arbitrary software**. This environment may be
-shared by many researchers in a lab, a whole research institution, or even be
-publicly accessible. If you have access to multiple environments of this kind,
-please describe the one that offers most support for your particular research
-purposes.
-
-
-.. raw:: html
-
- <table class="questionaire">
- <tr class="oddrow">
- <td>
-
-What fraction of time do you spend in this environment during your research
-activities?
-
-.. raw:: html
-
- </td><td class="response">
- <select name="man_time" size="1">
- <option value="none" selected="selected" label="Select an option">Select an option</option>
- <option value="notime" label="None/I don't use this">None/I don't use this</option>
- <option value="little" label="Less then half of the time">Less then half of the time</option>
- <option value="most" label="More than half of the time">More than half of the time</option>
- <option value="always" label="All of the time">All of the time</option>
- </select>
- </td></tr><tr><td>
-
-What type of hardware is this software environment running on?
-
-.. raw:: html
-
- </td><td class="response">
- <select name="man_hardware" size="1">
- <option value="none" selected="selected" label="Select an option">Select an option</option>
- <option value="laptop" label="Laptop/Portable device">Laptop/Portable device</option>
- <option value="desktop" label="Commodity desktop">Commodity desktop</option>
- <option value="workstation" label="High-performance workstation">High-performance workstation</option>
- <option value="cluster" label="Compute cluster">Compute cluster</option>
- <option value="grid" label="Grid/Cloud-computing facility">Grid/Cloud-computing facility</option>
- </select>
- </td></tr><tr class="oddrow"><td>
-
-
-What operating system is this environment running on?
-
-.. raw:: html
-
- </td><td class="response">
- <select name="man_os" size="1">
-
-.. raw:: html
- :file: select_os_options.inc
-
-.. raw:: html
-
- </select>
- </td>
- </tr>
- </table>
-
----------------------------------------------------------------
-
-How much do you agree to the following statements?
-
-.. raw:: html
-
- <table>
- <tr class="oddrow">
- <td class="task">
-
-This environment provides me with the best available tools for my research
-
-.. raw:: html
-
- </td><td class="response">
- <div class="rating">Definitely agree<br /><input type="radio" name="man_r1" value="3" /></div>
- <div class="rating">Mostly agree<br /><input type="radio" name="man_r1" value="2" /></div>
- <div class="rating">Mostly disagree<br /><input type="radio" name="man_r1" value="1" /></div>
- <div class="rating">Definitely disagree<br /><input type="radio" name="man_r1" value="0" /></div>
- </td></tr><tr><td class="task">
-
-The support staff solves all my technical problems and addresses my demands in
-a timely fashion
-
-.. raw:: html
-
- </td><td class="response">
- <div class="rating">Definitely agree<br /><input type="radio" name="man_r2" value="3" /></div>
- <div class="rating">Mostly agree<br /><input type="radio" name="man_r2" value="2" /></div>
- <div class="rating">Mostly disagree<br /><input type="radio" name="man_r2" value="1" /></div>
- <div class="rating">Definitely disagree<br /><input type="radio" name="man_r2" value="0" /></div>
- </td></tr><tr class="oddrow"><td class="task">
-
-There are always enough licenses for essential commerical software tools
-
-.. raw:: html
-
- </td><td class="response">
- <div class="rating">Definitely agree<br /><input type="radio" name="man_r3" value="3" /></div>
- <div class="rating">Mostly agree<br /><input type="radio" name="man_r3" value="2" /></div>
- <div class="rating">Mostly disagree<br /><input type="radio" name="man_r3" value="1" /></div>
- <div class="rating">Definitely disagree<br /><input type="radio" name="man_r3" value="0" /></div>
- </td></tr><tr><td class="task">
-
-I need to deploy additional software to be able to perform my research in this environment
-
-.. raw:: html
-
- </td><td class="response">
- <div class="rating">Definitely agree<br /><input type="radio" name="man_r4" value="3" /></div>
- <div class="rating">Mostly agree<br /><input type="radio" name="man_r4" value="2" /></div>
- <div class="rating">Mostly disagree<br /><input type="radio" name="man_r4" value="1" /></div>
- <div class="rating">Definitely disagree<br /><input type="radio" name="man_r4" value="0" /></div>
- </td></tr><tr class="oddrow"><td class="task">
-
-
-Using this managed environment is more cost effective than operating a suitable
-environment myself
-
-.. raw:: html
-
- </td><td class="response">
- <div class="rating">Definitely agree<br /><input type="radio" name="man_r5" value="3" /></div>
- <div class="rating">Mostly agree<br /><input type="radio" name="man_r5" value="2" /></div>
- <div class="rating">Mostly disagree<br /><input type="radio" name="man_r5" value="1" /></div>
- <div class="rating">Definitely disagree<br /><input type="radio" name="man_r5" value="0" /></div>
- </td></tr><tr><td class="task">
-
-.. raw:: html
-
- </td>
- </tr>
- </table>
-
-Virtualization
---------------
-
-The following questions are about your usage of systems for hardware
-virtualization in your research -- so-called **virtual machines**.
-Virtualization is a technology that allows running more than one operating
-systems on one machine at the same time.
-
-.. raw:: html
-
- <table>
- <tr class="oddrow">
- <td class="task">
-
-How often do you use virtual machines for your research purposes?
-
-.. raw:: html
-
- </td><td class="response">
- <select name="virt_time" size="1">
- <option value="none" selected="selected" label="Select an option">Select an option</option>
- <option value="never" label="Never">Never</option>
- <option value="occasionally" label="Occasionally">Occasionally</option>
- <option value="often" label="Often">Often</option>
- <option value="always" label="Exclusively">Exclusively</option>
- </select><div style="font-size:60%">(skip the remaining questions of this section if "never")</div>
- </td></tr><tr><td class="task">
-
-Which products for virtualization are you using?
-
-.. raw:: html
-
- </td><td class="response">
- <table><tr><td>
- <input type="checkbox" name="virt_prod" value="vmware" />VMWare<br />
- <input type="checkbox" name="virt_prod" value="virtualbox" />VirtualBox<br />
- <input type="checkbox" name="virt_prod" value="parallels" />Parallels<br />
- <input type="checkbox" name="virt_prod" value="qemu" />QEMU<br />
- </td><td>
- <input type="checkbox" name="virt_prod" value="virtualpc" />Virtual PC<br />
- <input type="checkbox" name="virt_prod" value="xen" />Xen<br />
- <input type="checkbox" name="virt_prod" value="kvm" />KVM<br />
- <input type="checkbox" name="virt_prod" value="other" />
- <input name="virt_other" type="text" size="20" maxlength="40">
- </td></tr></table>
- </td></tr><tr class="oddrow"><td>
-
-What **guest operating system** is running inside virtual machine?
-
-.. raw:: html
-
- </td><td class="response">
- <select name="virt_guest_os" size="1">
-
-.. raw:: html
- :file: select_os_options.inc
-
-.. raw:: html
-
- </select>
- </td></tr><tr><td>
-
-What **host operating system** are the virtual machines running on?
-
-.. raw:: html
-
- </td><td class="response">
- <select name="virt_host_os" size="1">
-
-.. raw:: html
- :file: select_os_options.inc
-
-.. raw:: html
-
- </select>
- </td></tr><tr><td colspan="2">
-
-What are your reasons for employing virtualization in you research?
-Please indicate how much you agree to the following statements
-
-.. raw:: html
-
- </td></tr><tr class="oddrow"><td class="task">
-
-I can run software that is otherwise incompatible with my system
-
-.. raw:: html
-
- </td><td class="response">
- <div class="rating">Definitely agree<br /><input type="radio" name="virt_r1" value="3" /></div>
- <div class="rating">Mostly agree<br /><input type="radio" name="virt_r1" value="2" /></div>
- <div class="rating">Mostly disagree<br /><input type="radio" name="virt_r1" value="1" /></div>
- <div class="rating">Definitely disagree<br /><input type="radio" name="virt_r1" value="0" /></div>
- </td></tr><tr><td class="task">
-
-I have the ability to easily create a snapshot of my whole analysis environment
-
-.. raw:: html
-
- </td><td class="response">
- <div class="rating">Definitely agree<br /><input type="radio" name="virt_r2" value="3" /></div>
- <div class="rating">Mostly agree<br /><input type="radio" name="virt_r2" value="2" /></div>
- <div class="rating">Mostly disagree<br /><input type="radio" name="virt_r2" value="1" /></div>
- <div class="rating">Definitely disagree<br /><input type="radio" name="virt_r2" value="0" /></div>
- </td></tr><tr class="oddrow"><td class="task">
-
-
-I can take my complete analysis environment with me and run it on different
-machines
-
-.. raw:: html
-
- </td><td class="response">
- <div class="rating">Definitely agree<br /><input type="radio" name="virt_r3" value="3" /></div>
- <div class="rating">Mostly agree<br /><input type="radio" name="virt_r3" value="2" /></div>
- <div class="rating">Mostly disagree<br /><input type="radio" name="virt_r3" value="1" /></div>
- <div class="rating">Definitely disagree<br /><input type="radio" name="virt_r3" value="0" /></div>
- </td></tr><tr><td class="task">
-
-The performance of a virtual machine is sufficient for routine application in my
-research
-
-.. raw:: html
-
- </td><td class="response">
- <div class="rating">Definitely agree<br /><input type="radio" name="virt_r4" value="3" /></div>
- <div class="rating">Mostly agree<br /><input type="radio" name="virt_r4" value="2" /></div>
- <div class="rating">Mostly disagree<br /><input type="radio" name="virt_r4" value="1" /></div>
- <div class="rating">Definitely disagree<br /><input type="radio" name="virt_r4" value="0" /></div>
- </td>
- </tr>
- </table>
-
-
-Resources for scientific software
----------------------------------
-
-Where do you obtain scientific software that you employ in your research? Please
-check all items that apply
-
-.. raw:: html
-
- <table class="questionaire">
- <tr class="oddrow">
- <td class="response"><input type="checkbox" name="software_resource" value="vendor" /></td><td>
-
-Directly from vendor or project website
-
-.. raw:: html
-
- </td></tr><tr><td class="response"><input type="checkbox" name="software_resource" value="retailer" /></td><td>
-
-Retailer
-
-.. raw:: html
-
- </td></tr><tr class="oddrow"><td class="response"><input type="checkbox" name="software_resource" value="os" /></td><td>
-
-Comes with the operating system
-
-.. raw:: html
-
- </td></tr><tr><td class="response"><input type="checkbox" name="software_resource" value="cpan" /></td><td>
-
-`Comprehensive Perl Archive Network (CPAN) <http://www.cpan.org>`_
-
-.. raw:: html
-
- </td></tr><tr class="oddrow"><td class="response"><input type="checkbox" name="software_resource" value="cran" /></td><td>
-
-`Comprehensive R Archive Network (CRAN) <http://cran.r-project.org>`_
-
-.. raw:: html
-
- </td></tr><tr><td class="response"><input type="checkbox" name="software_resource" value="epel" /></td><td>
-
-`Extra Packages for Enterprise Linux (EPEL) <http://fedoraproject.org/wiki/EPEL>`_
-
-.. raw:: html
-
- </td></tr><tr class="oddrow"><td class="response"><input type="checkbox" name="software_resource" value="fink" /></td><td>
-
-`Fink <http://www.finkproject.org>`_
-
-.. raw:: html
-
- </td></tr><tr><td class="response"><input type="checkbox" name="software_resource" value="freebsdports" /></td><td>
-
-`FreeBSD ports <http://www.freebsd.org/ports/science.html>`_
-
-.. raw:: html
-
- </td></tr><tr class="oddrow"><td class="response"><input type="checkbox" name="software_resource" value="incf" /></td><td>
-
-`International neuroinformatics Coordinating Facility (INCF) Research Tools <http://www.incf.org/resources/research-tools>`_
-
-.. raw:: html
-
- </td></tr><tr><td class="response"><input type="checkbox" name="software_resource" value=macports"" /></td><td>
-
-`Macports <http://www.macports.org>`_
-
-.. raw:: html
-
- </td></tr><tr class="oddrow"><td class="response"><input type="checkbox" name="software_resource" value="matlabcentral" /></td><td>
-
-`Matlab Central <http://www.mathworks.com/matlabcentral>`_
-
-.. raw:: html
-
- </td></tr><tr><td class="response"><input type="checkbox" name="software_resource" value=neurodebian"" /></td><td>
-
-`NeuroDebian <http://neuro.debian.net>`_
-
-.. raw:: html
-
- </td></tr><tr class="oddrow"><td class="response"><input type="checkbox" name="software_resource" value="nitrc" /></td><td>
-
-`Neuroimaging Informatics Tools and Resources Clearinghouse (NITRC) <http://www.nitrc.org>`_
-
-.. raw:: html
-
- </td></tr><tr><td class="response"><input type="checkbox" name="software_resource" value="pypi" /></td><td>
-
-`Python Package Index (PyPi) <http://pypi.python.org>`_
-
-.. raw:: html
-
- </td></tr><tr class="oddrow"><td class="response"><input type="checkbox" name="software_resource" value="pythonbundles" /></td><td>
-
-Python bundles: `Enthought Python <http://www.enthought.com/products/index.php>`_, `Python(x,y) <http://www.pythonxy.com/>`_
-
-.. raw:: html
-
- </td></tr><tr><td class="response"><input type="checkbox" name="software_resource" value="sourceforge" /></td><td>
-
-`Sourceforge <http://www.sourceforge.net>`_
-
-.. raw:: html
-
- </td></tr><tr class="oddrow"><td class="response"><input type="checkbox" name="software_resource" value="other" /></td><td>
- <input name="software_resource_other" type="text" size="40" maxlength="200">
- </td></tr></table>
-
-Software selection
-------------------
-
-Please select all software that you are using in your research.
-
-Generic computing/scripting/programming environments
-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
-
-.. raw:: html
-
- <table class="questionaire"><tr>
- <td class="response"><input type="checkbox" name="sw" value="cpp" />C/C++</td>
- <td class="response"><input type="checkbox" name="sw" value="idl" />IDL</td>
- <td class="response"><input type="checkbox" name="sw" value="lisrel" />LISREL</td>
- <td class="response"><input type="checkbox" name="sw" value="maple" />Maple</td>
- <td class="response"><input type="checkbox" name="sw" value="mathcad" />Mathcad</td>
- <td class="response"><input type="checkbox" name="sw" value="mathematica" />Mathematica</td>
- </tr><tr class="oddrow">
- <td class="response"><input type="checkbox" name="sw" value="matlab" />Matlab</td>
- <td class="response"><input type="checkbox" name="sw" value="octave" />Octave</td>
- <td class="response"><input type="checkbox" name="sw" value="perl" />Perl</td>
- <td class="response"><input type="checkbox" name="sw" value="python" />Python</td>
- <td class="response"><input type="checkbox" name="sw" value="r" />R</td>
- <td class="response"><input type="checkbox" name="sw" value="ruby" />Ruby</td>
- </tr><tr>
- <td class="response"><input type="checkbox" name="sw" value="scilab" />Scilab</td>
- <td class="response"><input type="checkbox" name="sw" value="spss" />SPSS</td>
- <td class="response"><input type="checkbox" name="sw" value="scirun" />SCIRun</td>
- <td class="response"><input type="checkbox" name="sw" value="shell" />Shell scripting</td>
- </tr></table>
-
-Distributed computing - frameworks and controllers
-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
-
-.. raw:: html
-
- <table class="questionaire"><tr>
- <td class="response"><input type="checkbox" name="sw" value="sge" />SGE</td>
- <td class="response"><input type="checkbox" name="sw" value="torque" />Torque/OpenPBS/Maui</td>
- <td class="response"><input type="checkbox" name="sw" value="condor" />Condor</td>
- <td class="response"><input type="checkbox" name="sw" value="globus" />Globus</td>
- <td class="response"><input type="checkbox" name="sw" value="mpi" />MPI (any)</td>
- <td class="response"><input type="checkbox" name="sw" value="ipython" />IPython</td>
- </tr></table>
-
-Imaging
-~~~~~~~
-
-.. raw:: html
-
- <table class="questionaire"><tr>
- <td class="response"><input type="checkbox" name="sw" value="3dslicer" />3D Slicer</td>
- <td class="response"><input type="checkbox" name="sw" value="afni" />AFNI</td>
- <td class="response"><input type="checkbox" name="sw" value="aeskulap" />Aeskulap</td>
- <td class="response"><input type="checkbox" name="sw" value="amide" />Amide</td>
- </tr><tr class="oddrow">
- <td class="response"><input type="checkbox" name="sw" value="birn" />BIRN Tools</td>
- <td class="response"><input type="checkbox" name="sw" value="brainstools" />BRAINS Tools</td>
- <td class="response"><input type="checkbox" name="sw" value="bioimgsuite" />Bioimage Suite</td>
- <td class="response"><input type="checkbox" name="sw" value="brainmap" />BrainMap</td>
- </tr><tr>
- <td class="response"><input type="checkbox" name="sw" value="brainvisa" />BrainVISA/Anatomist</td>
- <td class="response"><input type="checkbox" name="sw" value="brainvoyager" />BrainVoyager</td>
- <td class="response"><input type="checkbox" name="sw" value="cmtk" />CMTK</td>
- <td class="response"><input type="checkbox" name="sw" value="caret" />Caret</td>
- </tr><tr class="oddrow">
- <td class="response"><input type="checkbox" name="sw" value="connectomviewer" />ConnectomeViewer</td>
- <td class="response"><input type="checkbox" name="sw" value="dsi" />DSI Studio</td>
- <td class="response"><input type="checkbox" name="sw" value="dtitk" />DTI-TK</td>
- <td class="response"><input type="checkbox" name="sw" value="trackvis" />Diffusion Toolkit/Trackvis</td>
- </tr><tr>
- <td class="response"><input type="checkbox" name="sw" value="fsl" />FSL</td>
- <td class="response"><input type="checkbox" name="sw" value="fiji" />Fiji</td>
- <td class="response"><input type="checkbox" name="sw" value="freesurfer" />FreeSurfer</td>
- <td class="response"><input type="checkbox" name="sw" value="itksnap" />ITK-SNAP</td>
- </tr><tr class="oddrow">
- <td class="response"><input type="checkbox" name="sw" value="imagej" />ImageJ</td>
- <td class="response"><input type="checkbox" name="sw" value="invesalius" />Invesalius</td>
- <td class="response"><input type="checkbox" name="sw" value="loni" />LONI</td>
- <td class="response"><input type="checkbox" name="sw" value="lipsia" />Lipsia</td>
- </tr><tr>
- <td class="response"><input type="checkbox" name="sw" value="mango" />Mango</td>
- <td class="response"><input type="checkbox" name="sw" value="mipav" />MIPAV/JIST</td>
- <td class="response"><input type="checkbox" name="sw" value="mni" />MNI tools</td>
- <td class="response"><input type="checkbox" name="sw" value="mricron" />MRIcron</td>
- </tr><tr class="oddrow">
- <td class="response"><input type="checkbox" name="sw" value="mrtrix" />MRtrix</td>
- <td class="response"><input type="checkbox" name="sw" value="mvpa" />Matlab MVPA toolbox</td>
- <td class="response"><input type="checkbox" name="sw" value="nibabel" />NiBabel/PyNIfTI</td>
- <td class="response"><input type="checkbox" name="sw" value="nipy" />NiPy/NiTime/DiPy/NiPype</td>
- </tr><tr>
- <td class="response"><input type="checkbox" name="sw" value="pymvpa" />PyMVPA</td>
- <td class="response"><input type="checkbox" name="sw" value="rest" />REST</td>
- <td class="response"><input type="checkbox" name="sw" value="spm" />SPM</td>
- <td class="response"><input type="checkbox" name="sw" value="v3d" />V3D</td>
- </tr><tr class="oddrow">
- <td class="response"><input type="checkbox" name="sw" value="voxbo" />VoxBo</td>
- </tr></table>
-
-Data management
-~~~~~~~~~~~~~~~
-
-.. raw:: html
-
- <table class="questionaire"><tr>
- <td class="response"><input type="checkbox" name="sw" value="xnat" />XNAT/PyXNAT/...</td>
- <td class="response"><input type="checkbox" name="sw" value="hid" />Human Imaging Database (HID)</td>
- </tr></table>
-
-Neural systems modeling
-~~~~~~~~~~~~~~~~~~~~~~~
-
-.. raw:: html
-
- <table class="questionaire"><tr>
- <td class="response"><input type="checkbox" name="sw" value="brian" />Brian</td>
- <td class="response"><input type="checkbox" name="sw" value="iqr" />iqr</td>
- <td class="response"><input type="checkbox" name="sw" value="iNVT" />iNVT</td>
- <td class="response"><input type="checkbox" name="sw" value="neuron" />NEURON</td>
- <td class="response"><input type="checkbox" name="sw" value="nest" />NEST</td>
- <td class="response"><input type="checkbox" name="sw" value="genesis" />Genesis</td>
- <td class="response"><input type="checkbox" name="sw" value="moose" />Moose</td>
- <td class="response"><input type="checkbox" name="sw" value="pcsim" />PCSIM</td>
- <td class="response"><input type="checkbox" name="sw" value="pynn" />PyNN</td>
- <td class="response"><input type="checkbox" name="sw" value="topographica" />Topographica</td>
- </tr></table>
-
-Electrophysiology, MEG/EEG
-~~~~~~~~~~~~~~~~~~~~~~~~~~
-
-.. raw:: html
-
- <table class="questionaire"><tr>
- <td class="response"><input type="checkbox" name="sw" value="besa" />BESA</td>
- <td class="response"><input type="checkbox" name="sw" value="biosig" />BioSig</td>
- <td class="response"><input type="checkbox" name="sw" value="brainstorm" />BrainStorm</td>
- <td class="response"><input type="checkbox" name="sw" value="chronus" />Chronus</td>
- <td class="response"><input type="checkbox" name="sw" value="eeglab" />EEGLAB</td>
- <td class="response"><input type="checkbox" name="sw" value="elekta" />Elekta Neuromag</td>
- </tr><tr class="oddrow">
- <td class="response"><input type="checkbox" name="sw" value="fieldtrip" />Fieldtrip</td>
- <td class="response"><input type="checkbox" name="sw" value="klustakwik" />KlustaKwik</td>
- <td class="response"><input type="checkbox" name="sw" value="loreta" />LORETA/sLORETA</td>
- <td class="response"><input type="checkbox" name="sw" value="mne" />MNE suite</td>
- <td class="response"><input type="checkbox" name="sw" value="neuroexplorer" />NeuroExplorer</td>
- <td class="response"><input type="checkbox" name="sw" value="openmeeg" />OpenMEEG</td>
- </tr><tr>
- <td class="response"><input type="checkbox" name="sw" value="openelectrophy" />Openelectrophy</td>
- <td class="response"><input type="checkbox" name="sw" value="rtxi" />RTXI</td>
- <td class="response"><input type="checkbox" name="sw" value="relacs" />Relacs</td>
- <td class="response"><input type="checkbox" name="sw" value="trellis" />?Trellis-neuro</td>
- </tr></table>
-
-Brain-computer interface
-~~~~~~~~~~~~~~~~~~~~~~~~
-
-.. raw:: html
-
- <table class="questionaire"><tr>
- <td class="response"><input type="checkbox" name="sw" value="bci2000" />BCI2000</td>
- <td class="response"><input type="checkbox" name="sw" value="openvibe" />OpenVIBE</td>
- <td class="response"><input type="checkbox" name="sw" value="pyff" />Pyff</td>
- </tr></table>
-
-Hardware interface/Data acquisition
-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
-
-.. raw:: html
-
- <table class="questionaire"><tr>
- <td class="response"><input type="checkbox" name="sw" value="comedi" />Comedi</td>
- <td class="response"><input type="checkbox" name="sw" value="epics" />EPICS</td>
- <td class="response"><input type="checkbox" name="sw" value="mx" />MX</td>
- </tr></table>
-
-Real-time solutions
-~~~~~~~~~~~~~~~~~~~
-
-.. raw:: html
-
- <table class="questionaire"><tr>
- <td class="response"><input type="checkbox" name="sw" value="rtai" />RTAI</td>
- <td class="response"><input type="checkbox" name="sw" value="xenomai" />Xenomai</td>
- <td class="response"><input type="checkbox" name="sw" value="rtlinux" />RTLinux</td>
- <td class="response"><input type="checkbox" name="sw" value="preempt_rt" />PREEMPT_RT</td>
- </tr></table>
-
-Psychophysics/Experimental control
-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
-
-.. raw:: html
-
- <table class="questionaire"><tr>
- <td class="response"><input type="checkbox" name="sw" value="dmdx" />DMDX</td>
- <td class="response"><input type="checkbox" name="sw" value="eprime" />E-Prime</td>
- <td class="response"><input type="checkbox" name="sw" value="presentation" />Presentation</td>
- <td class="response"><input type="checkbox" name="sw" value="psychopy" />PsychoPy</td>
- <td class="response"><input type="checkbox" name="sw" value="pyepl" />PyEPL</td>
- <td class="response"><input type="checkbox" name="sw" value="psychtoolbox" />Psychtoolbox</td>
- </tr><tr class="oddrow">
- <td class="response"><input type="checkbox" name="sw" value="psytoolkit" />Psytoolkit</td>
- <td class="response"><input type="checkbox" name="sw" value="opensesame" />OpenSesame</td>
- <td class="response"><input type="checkbox" name="sw" value="visionegg" />VisionEgg</td>
- <td class="response"><input type="checkbox" name="sw" value="tscope" />Tscope</td>
- </tr></table>
-
-Other
-~~~~~
-
-.. raw:: html
-
- <table class="questionaire"><tr>
- <td class="response"><input type="checkbox" name="sw" value="other" />
- <input name="sw_other" type="text" size="40" maxlength="200"> <span style="font-size:70%">(comma-separated list)</span></td>
- </tr></table>
-
----------------------------------------------------------------
-
-Thanks for filling out the questionaire. Upon successful submission you will
-be presented with some statistics computed from all previous participants.
-
-.. raw:: html
-
- <input value="Go" type="submit">
- <div id="server_response"></div>
- </form>
-
-
-