]> git.donarmstrong.com Git - bamtools.git/commit
Moved BamAlignmentSupportData into BamAlignment data type. This continues the read...
authorDerek <derekwbarnett@gmail.com>
Thu, 10 Jun 2010 04:50:37 +0000 (00:50 -0400)
committerDerek <derekwbarnett@gmail.com>
Thu, 10 Jun 2010 04:50:37 +0000 (00:50 -0400)
commit41da74387a2c1db662a416d20d7150ec1a745212
tree7e2fc5a3a78c42c560aca98c4180f721833455fa
parente4f12462a1553230cfc9ef1474d46803fb9e9c92
Moved BamAlignmentSupportData into BamAlignment data type. This continues the read/write speedup mentioned in prior commits, but removes the need for clients to manage this additional auxilary data object. The 'BamAlignment lite' is accessed by calling BamReader::GetNextAlignmentCore() and written by BamWriter::SaveAlignment() which checks to see how much parsing & packing is needed before writing.
BamAux.h
BamReader.cpp
BamReader.h
BamWriter.cpp
BamWriter.h
bamtools_merge.cpp