X-Git-Url: https://git.donarmstrong.com/?a=blobdiff_plain;f=venncommand.h;h=9f369280fc66e53754da98a4b6252568a7960d90;hb=035f86272c776e1cccaa47021e26782e49cd41e7;hp=47f52015674aa52cd3f137b49d203e78ff1ae70d;hpb=e150b0b0664caec517485ee6d69dcdade6dcae77;p=mothur.git diff --git a/venncommand.h b/venncommand.h index 47f5201..9f36928 100644 --- a/venncommand.h +++ b/venncommand.h @@ -25,9 +25,11 @@ public: vector setParameters(); string getCommandName() { return "venn"; } string getCommandCategory() { return "OTU-Based Approaches"; } + string getOutputFileNameTag(string, string); string getHelpString(); string getCitation() { return "http://www.mothur.org/wiki/Venn"; } - + string getDescription() { return "generates a Venn diagram from data provided in a shared file"; } + int execute(); void help() { m->mothurOut(getHelpString()); } @@ -39,7 +41,7 @@ private: vector lookup; set< set > combosOfFour; SAbundVector* sabund; - int abund; + int abund, fontsize; bool abort, allLines, nseqs, perm; set labels; //holds labels to be used