X-Git-Url: https://git.donarmstrong.com/?a=blobdiff_plain;f=venn.h;h=db26b272045458540cfb4ab7ca2f44bd563ba4bc;hb=3914b0d6480f67df53b1e838f51c4e6155710434;hp=398f20bb1872832aed6ab89240ce120a0405f623;hpb=c5c7502f435e1413c19e373dab1dfebcaa67588d;p=mothur.git diff --git a/venn.h b/venn.h index 398f20b..db26b27 100644 --- a/venn.h +++ b/venn.h @@ -9,38 +9,31 @@ * */ -using namespace std; - -#include "ordervector.hpp" -#include "Sabundvector.hpp" +#include "sabundvector.hpp" #include "sharedrabundvector.h" -#include "sharedordervector.h" #include "datavector.hpp" -#include "globaldata.hpp" #include "calculator.h" -#include "sharedutilities.h" + /***********************************************************************/ class Venn { - - public: - Venn(); - ~Venn(){}; - - void getPic(OrderVector*, vector); - void getPic(SharedOrderVector*, vector); - - private: - SharedUtil* util; - SAbundVector* sabund; - GlobalData* globaldata; - vector lookup; - string format, groupComb; - ofstream outsvg; - - +public: + Venn(string, bool, string, int, bool); + ~Venn(){}; + + vector getPic(SAbundVector*, vector); + vector getPic(vector, vector); + +private: + Calculator* singleCalc; + string groupComb, outputDir, inputfile; + ofstream outsvg; + MothurOut* m; + bool nseqs, sharedOtus; + int fontSize; }; + /***********************************************************************/ #endif