X-Git-Url: https://git.donarmstrong.com/?a=blobdiff_plain;f=venn.h;h=d3a3f05b841e768554746b14fa087d0baef28bfe;hb=aba5f8811829037b0a3004ef33f0ad4ed5e5fcf8;hp=748723e85dd068722d09179dab76ee1dd2968390;hpb=2c5f6dfaab750da109bb7bc7e51b005d135c2d77;p=mothur.git diff --git a/venn.h b/venn.h index 748723e..d3a3f05 100644 --- a/venn.h +++ b/venn.h @@ -9,39 +9,31 @@ * */ -using namespace std; - -#include "ordervector.hpp" #include "sabundvector.hpp" #include "sharedrabundvector.h" -#include "sharedordervector.h" #include "datavector.hpp" #include "globaldata.hpp" #include "calculator.h" -#include "sharedutilities.h" + /***********************************************************************/ class Venn { - - public: - Venn(); - ~Venn(){}; - - void getPic(OrderVector*, vector); - void getPic(SharedOrderVector*, vector); - - private: - SharedUtil* util; - SAbundVector* sabund; - GlobalData* globaldata; - Calculator* singleCalc; - vector lookup; - string format, groupComb; - ofstream outsvg; - - +public: + Venn(string); + ~Venn(){}; + + vector getPic(SAbundVector*, vector); + vector getPic(vector, vector); + +private: + GlobalData* globaldata; + Calculator* singleCalc; + string groupComb, outputDir; + ofstream outsvg; + MothurOut* m; }; + /***********************************************************************/ #endif