X-Git-Url: https://git.donarmstrong.com/?a=blobdiff_plain;f=validparameter.h;h=61b1c5b2d90ee0e805bc205c5fe8b19b5a4a5c97;hb=eb1c88346fb246e95a6b38935b103f95e38b82ca;hp=c03c034f41b6308b4945753147abda65cddf48d7;hpb=bfbc55964f1977da72c2cea984288a427d370a59;p=mothur.git

diff --git a/validparameter.h b/validparameter.h
index c03c034..61b1c5b 100644
--- a/validparameter.h
+++ b/validparameter.h
@@ -12,6 +12,7 @@
 using namespace std;
 
 #include "mothur.h"
+#include "utilities.hpp"
 
 //This class contains a list of all valid parameters in Mothur.  
 //It has a function which will tell you if your parameter is valid.
@@ -24,9 +25,32 @@ class ValidParameters {
 		ValidParameters();
 		~ValidParameters();
 		bool isValidParameter(string);
+		bool isValidParameter(string, string, string);
+		vector <string> addParameters(string[], int);
+		void initCommandParameters();
+		void initParameterRanges();
+
 	private:
-		map<string, string> parameters;
+		map<string, string> readdist;
+		map<string, string> readotu;
+		map<string, string> readtree;
+		map<string, string> cluster;
+		map<string, string> deconvolute;
+		map<string, string> parsimony;
+		map<string, string> collectsingle;
+		map<string, string> collectshared;
+		map<string, string> rarefactsingle;
+		map<string, string> rarefactshared;
+		map<string, string> summarysingle;
+		map<string, string> summaryshared;
+		map<string, string> unifracweighted;
+		map<string, string> unifracunweighted;
+		map<string, string> libshuff;
+		map<string, string> heatmap;
+		
 		map<string, string>::iterator it;
+		map<string, vector<string> > commandParameters;
+		map<string, vector<string> > parameterRanges;
 
 };