X-Git-Url: https://git.donarmstrong.com/?a=blobdiff_plain;f=validcommands.cpp;h=544933c804abcf2d1aa372936352d9c476aac838;hb=5b7ac70116137b52dd7884b76c5bca660a5fea38;hp=696214e236be1b44cfc63335ee9caecc96249ea8;hpb=51cf89e90eef8b300c2786eb1560dd89e6e83445;p=mothur.git

diff --git a/validcommands.cpp b/validcommands.cpp
index 696214e..544933c 100644
--- a/validcommands.cpp
+++ b/validcommands.cpp
@@ -21,6 +21,8 @@ ValidCommands::ValidCommands() {
 		commands["get.oturep"]			= "get.oturep";
 		commands["cluster"]				= "cluster"; 
 		commands["deconvolute"]			= "deconvolute"; 
+		commands["dist.seqs"]			= "dist.seqs";
+		commands["dist.shared"]			= "dist.shared";
 		commands["collect.single"]		= "collect.single"; 
 		commands["collect.shared"]		= "collect.shared"; 
 		commands["rarefaction.single"]	= "rarefaction.single"; 
@@ -38,7 +40,11 @@ ValidCommands::ValidCommands() {
 		commands["get.label"]           = "get.label";
 		commands["get.line"]            = "get.line";
 		commands["bootstrap.shared"]	= "bootstrap.shared";
+		commands["concensus"]			= "concensus";
 		commands["help"]				= "help"; 
+		commands["filter.seqs"]			= "filter.seqs";
+		commands["align.seqs"]			= "align.seqs";
+		commands["summary.seqs"]		= "summary.seqs";
 		commands["quit"]				= "quit";