X-Git-Url: https://git.donarmstrong.com/?a=blobdiff_plain;f=unweighted.h;h=e751d2e79d19f17a2dd3a9af34ea11be95586ef4;hb=2bb9267aa4b4ecdf8488b06605cc9f3f36fa4332;hp=598af1a9a561fb51a5861c9e26a4c1994b1d2ad3;hpb=edad2fa8defaa6856b3606a215bf64b91340eeb4;p=mothur.git

diff --git a/unweighted.h b/unweighted.h
index 598af1a..e751d2e 100644
--- a/unweighted.h
+++ b/unweighted.h
@@ -19,7 +19,7 @@
 class Unweighted : public TreeCalculator  {
 	
 	public:
-		Unweighted(TreeMap* t) : tmap(t) {};
+		Unweighted(TreeMap* t, bool r) : tmap(t), includeRoot(r) {};
 		~Unweighted() {};
 		EstOutput getValues(Tree*, int, string);
 		EstOutput getValues(Tree*, string, string, int, string);
@@ -32,12 +32,12 @@ class Unweighted : public TreeCalculator  {
 		};
 		vector<linePair> lines;
 		
-		GlobalData* globaldata;
 		EstOutput data;
 		TreeMap* tmap;
 		int processors;
 		string outputDir;
 		map< vector<string>, set<int> > rootForGrouping;  //maps a grouping combo to the roots for that combo
+		bool includeRoot;
 		
 		EstOutput driver(Tree*, vector< vector<string> >, int, int); 
 		EstOutput createProcesses(Tree*, vector< vector<string> >);