X-Git-Url: https://git.donarmstrong.com/?a=blobdiff_plain;f=unifracweightedcommand.h;h=06354ce5cbeed8dc7c1629a482c65d9381b40e04;hb=ce8794490ab1d83adcdb2b92e0302a1e43e17adf;hp=ddbdc8548dad7e0545d75f8e98cd92fdb76a3419;hpb=f55cf350ca6643f8eb070d8336e1957699a3f109;p=mothur.git

diff --git a/unifracweightedcommand.h b/unifracweightedcommand.h
index ddbdc85..06354ce 100644
--- a/unifracweightedcommand.h
+++ b/unifracweightedcommand.h
@@ -28,7 +28,8 @@ class UnifracWeightedCommand : public Command {
 		vector<string> setParameters();
 		string getCommandName()			{ return "unifrac.weighted";		}
 		string getCommandCategory()		{ return "Hypothesis Testing";		}
-		string getHelpString();	
+		string getOutputFileNameTag(string, string);
+	string getHelpString();	
 		string getCitation() { return "Lozupone CA, Hamady M, Kelley ST, Knight R (2007). Quantitative and qualitative beta diversity measures lead to different insights into factors that structure microbial communities. Appl Environ Microbiol 73: 1576-85. \nhttp://www.mothur.org/wiki/Unifrac.weighted"; }
 		string getDescription()		{ return "generic tests that describes whether two or more communities have the same structure"; }
 
@@ -59,7 +60,7 @@ class UnifracWeightedCommand : public Command {
 		bool abort, phylip, random, includeRoot, subsample, consensus;
 		string groups, itersString, outputForm, treefile, groupfile, namefile;
 		vector<string> Groups, outputNames; //holds groups to be used
-		int processors, numUniquesInName, subsampleSize, subsampleIters;
+		int processors, subsampleSize, subsampleIters;
 		ofstream outSum;
 		map<string, string> nameMap;