X-Git-Url: https://git.donarmstrong.com/?a=blobdiff_plain;f=trimflowscommand.cpp;h=6a3535fb4af55ee1b217c9a18c4fc83e08db7539;hb=dc383fb61b6d165a8d36e6108df8bc7129243ae6;hp=d45f20cae1f0516c014d42cf7e6afaef57d2a1a2;hpb=49d2b7459c5027557564b21e9487dadafbbbdc96;p=mothur.git diff --git a/trimflowscommand.cpp b/trimflowscommand.cpp index d45f20c..6a3535f 100644 --- a/trimflowscommand.cpp +++ b/trimflowscommand.cpp @@ -423,11 +423,9 @@ int TrimFlowsCommand::driverCreateTrim(string flowFileName, string trimFlowFileN string trashCode = ""; flowData.getNext(flowFile); - //cout << "driver good bit " << flowFile.good() << endl; flowData.capFlows(maxFlows); Sequence currSeq = flowData.getSequence(); - if(!flowData.hasMinFlows(minFlows)){ //screen to see if sequence is of a minimum number of flows success = 0; trashCode += 'l';