X-Git-Url: https://git.donarmstrong.com/?a=blobdiff_plain;f=trimflowscommand.cpp;h=0557c71bda3453068175fe3d405ff87972df80e1;hb=8da8321bc4d705f6c156248d6229c60a0204f750;hp=346902c38b36a2b7565493810e503467ada284dd;hpb=b86361f726a0d1dfc9f2e91b795e402d97c46f9d;p=mothur.git diff --git a/trimflowscommand.cpp b/trimflowscommand.cpp index 346902c..0557c71 100644 --- a/trimflowscommand.cpp +++ b/trimflowscommand.cpp @@ -409,7 +409,7 @@ int TrimFlowsCommand::driverCreateTrim(string flowFileName, string trimFlowFileN success = 0; trashCode += 'l'; } - cout << currSeq.getName() << endl << currSeq.getUnaligned() << endl; + int primerIndex = 0; int barcodeIndex = 0;