X-Git-Url: https://git.donarmstrong.com/?a=blobdiff_plain;f=treemap.h;h=244348ef1f52d3768a585e1960fd0d1b20424d49;hb=d3aed959ca3b68890eeb7b815e24210bcfeb256c;hp=d4b506e6fb1d26675937f89f2cc1591e21a98c07;hpb=e03de8796670a0c747aed63483daa09c8b86aea0;p=mothur.git

diff --git a/treemap.h b/treemap.h
index d4b506e..244348e 100644
--- a/treemap.h
+++ b/treemap.h
@@ -28,7 +28,7 @@ public:
 	TreeMap() { m = MothurOut::getInstance(); }
 	TreeMap(string);
 	~TreeMap();
-	void readMap();
+	int readMap();
 	int getNumGroups();
 	int getNumSeqs();
 	void setIndex(string, int);  //sequencename, index
@@ -42,7 +42,7 @@ public:
     map<string,int> seqsPerGroup;	//groupname, number of seqs in that group.
 	map<string, GroupIndex> treemap; //sequence name and <groupname, vector index>
 	void print(ostream&);
-	void makeSim(GroupMap*);  //takes groupmap info and fills treemap for use by tree.shared command.
+	void makeSim(vector<string>);  //takes groupmap info and fills treemap for use by tree.shared command.
 	void makeSim(ListVector*);  //takes listvector info and fills treemap for use by tree.shared command.	
 	
 private: