X-Git-Url: https://git.donarmstrong.com/?a=blobdiff_plain;f=treemap.cpp;h=dcef7f7c19174f1aaf6a1435931c9005f986f638;hb=cad05a21b084833b07808c1586e755be48fe7e1a;hp=cd046f9dced6bbbe33c0d611d603217e28884d7c;hpb=5a1e62397b91f57d0d3aff635891df04b8999a88;p=mothur.git

diff --git a/treemap.cpp b/treemap.cpp
index cd046f9..dcef7f7 100644
--- a/treemap.cpp
+++ b/treemap.cpp
@@ -26,10 +26,10 @@ void TreeMap::readMap() {
 		while(fileHandle){
 			fileHandle >> seqName;			//read from first column
 			fileHandle >> seqGroup;			//read from second column
-			
+
 			namesOfSeqs.push_back(seqName);
 			setNamesOfGroups(seqGroup);
-						
+					
 			treemap[seqName].groupname = seqGroup;	//store data in map
 			
 			it2 = seqsPerGroup.find(seqGroup);
@@ -135,7 +135,7 @@ bool TreeMap::isValidGroup(string groupname) {
 		return false;
 	}
 	catch(exception& e) {
-		errorOut(e, "TreeMap", "isValidGroup");
+		m->errorOut(e, "TreeMap", "isValidGroup");
 		exit(1);
 	}
 }
@@ -149,7 +149,7 @@ void TreeMap::print(ostream& output){
 		}
 	}
 	catch(exception& e) {
-		errorOut(e, "TreeMap", "print");
+		m->errorOut(e, "TreeMap", "print");
 		exit(1);
 	}
 }
@@ -173,7 +173,7 @@ void TreeMap::makeSim(GroupMap* groupmap) {
 		
 	}
 	catch(exception& e) {
-		errorOut(e, "TreeMap", "makeSim");
+		m->errorOut(e, "TreeMap", "makeSim");
 		exit(1);
 	}
 }
@@ -199,7 +199,7 @@ void TreeMap::makeSim(ListVector* list) {
 		
 	}
 	catch(exception& e) {
-		errorOut(e, "TreeMap", "makeSim");
+		m->errorOut(e, "TreeMap", "makeSim");
 		exit(1);
 	}
 }