X-Git-Url: https://git.donarmstrong.com/?a=blobdiff_plain;f=treecalculator.h;fp=treecalculator.h;h=0bc41d9a2bc27db88a40c03bd40278692de88366;hb=d037597badc8d18e235c59f0c1114180edb7f98f;hp=0000000000000000000000000000000000000000;hpb=58cf1d08fee8c64334979075fa57bcafb035a2ed;p=mothur.git

diff --git a/treecalculator.h b/treecalculator.h
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+#ifndef TREECALCULATOR_H
+#define TREECALCULATOR_H
+
+/*
+ *  treecalculator.h
+ *  Mothur
+ *
+ *  Created by Sarah Westcott on 1/26/09.
+ *  Copyright 2009 Schloss Lab UMASS Amherst. All rights reserved.
+ *
+ */
+
+using namespace std;
+
+#include <vector>
+#include <cmath>
+#include <math.h>
+#include <string>
+#include <map>
+#include <algorithm>
+#include "utilities.hpp"
+#include "tree.h"
+
+/* The tree calculator class is the parent class for tree calculators in mothur. */ 
+
+typedef vector<double> EstOutput;
+
+/***********************************************************************/
+
+class TreeCalculator {
+
+public:
+	TreeCalculator(){};
+	TreeCalculator(string n) : name(n) {};
+	~TreeCalculator(){};
+	virtual EstOutput getValues(Tree*) = 0;	
+	
+	virtual string getName()		{	return name;	}
+		
+protected:
+	EstOutput data;
+	string name;
+
+};
+
+/***********************************************************************/
+
+#endif
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