X-Git-Url: https://git.donarmstrong.com/?a=blobdiff_plain;f=taxonomynode.cpp;fp=taxonomynode.cpp;h=b90bda1927d1d8afadf9e69469b68b61ccbad205;hb=e8e13c129ba8184ec5932a090773f353f3ae3406;hp=0000000000000000000000000000000000000000;hpb=035f86272c776e1cccaa47021e26782e49cd41e7;p=mothur.git

diff --git a/taxonomynode.cpp b/taxonomynode.cpp
new file mode 100755
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--- /dev/null
+++ b/taxonomynode.cpp
@@ -0,0 +1,72 @@
+/*
+ *  taxonomynode.cpp
+ *  
+ *
+ *  Created by Pat Schloss on 7/8/11.
+ *  Copyright 2011 Patrick D. Schloss. All rights reserved.
+ *
+ */
+
+/**************************************************************************************************/
+
+#include "taxonomynode.h"
+
+/**************************************************************************************************/
+
+TaxonomyNode::TaxonomyNode(string n, int l): name(n), level(l){
+    m = MothurOut::getInstance();
+	parent = -1;
+	numChildren = 0;
+	numSeqs = 0;
+}
+
+/**************************************************************************************************/
+
+void TaxonomyNode::setName(string n)			{	name = n;					}
+
+/**************************************************************************************************/
+
+string TaxonomyNode::getName()					{	return name;				}
+
+/**************************************************************************************************/
+
+void TaxonomyNode::setParent(int p)				{	parent = p;					}
+
+/**************************************************************************************************/
+
+int TaxonomyNode::getParent()					{	return parent;				}
+
+/**************************************************************************************************/
+
+void TaxonomyNode::makeChild(string c, int i)	{	children[c] = i;			}
+
+
+/**************************************************************************************************/
+
+map<string, int> TaxonomyNode::getChildren()	{	return children;			}
+
+/**************************************************************************************************/
+
+int TaxonomyNode::getChildIndex(string c){
+	map<string, int>::iterator it = children.find(c);
+	if(it != children.end())	{	return it->second;			}
+	else						{	return -1;					}	
+}
+
+/**************************************************************************************************/
+
+int	TaxonomyNode::getNumKids()					{	return (int)children.size();		}
+
+/**************************************************************************************************/
+
+int	TaxonomyNode::getNumSeqs()					{	return numSeqs;				}
+
+/**************************************************************************************************/
+
+void TaxonomyNode::setTotalSeqs(int n)			{	totalSeqs = n;				}
+
+/**************************************************************************************************/
+
+int TaxonomyNode::getLevel()					{	return level;				}
+
+/**************************************************************************************************/