X-Git-Url: https://git.donarmstrong.com/?a=blobdiff_plain;f=taxonomyequalizer.cpp;h=1d2832d5fc3a3ba31861d75d93dd202caf82261e;hb=202846c98b9eff0eca7b20a570bfffa8ee4a5f4e;hp=c7e8cb9e4add8388602dc2bfc12cff28673f7db3;hpb=058715887611e00dc18324cb0bd4a4a8472530b3;p=mothur.git diff --git a/taxonomyequalizer.cpp b/taxonomyequalizer.cpp index c7e8cb9..1d2832d 100644 --- a/taxonomyequalizer.cpp +++ b/taxonomyequalizer.cpp @@ -88,19 +88,19 @@ int TaxEqualizer::getHighestLevel(ifstream& in) { //save sequences level seqLevels[name] = thisLevel; - + //is this the longest taxonomy? if (thisLevel > level) { level = thisLevel; testTax = tax; //testTax is used to figure out if this file has confidences we need to strip out - } + } } int pos = testTax.find_first_of('('); //if there are '(' then there are confidences we need to take out if (pos != -1) { containsConfidence = true; } - + return level; }