X-Git-Url: https://git.donarmstrong.com/?a=blobdiff_plain;f=systemcommand.h;h=27adf7c5993289bc0edeeb9f56b8de5939b2bfb0;hb=bd27c2b0612942815b7417c79f7ee41f669a2a34;hp=8c959cfb52302df67651a4196ea533751ad596a1;hpb=9d6f36294dcaef3ac65a0e69fd8140077c3209e0;p=mothur.git

diff --git a/systemcommand.h b/systemcommand.h
index 8c959cf..27adf7c 100644
--- a/systemcommand.h
+++ b/systemcommand.h
@@ -24,8 +24,11 @@ class SystemCommand : public Command {
 		vector<string> setParameters();
 		string getCommandName()			{ return "system";		}
 		string getCommandCategory()		{ return "General";		}
-		string getHelpString();	
-	
+        string getHelpString();	
+        string getOutputPattern(string){ return ""; }	
+		string getCitation() { return "http://www.mothur.org/wiki/System"; }
+		string getDescription()		{ return "execute system commands from within mothur"; }
+
 		int execute(); 
 		void help() { m->mothurOut(getHelpString()); }