X-Git-Url: https://git.donarmstrong.com/?a=blobdiff_plain;f=summarycommand.h;fp=summarycommand.h;h=4936dd8e9ad004bbf18352bb36659463c62be746;hb=49d2b7459c5027557564b21e9487dadafbbbdc96;hp=1d93a333a8c971458ced6ca8803cb0b2027a48b2;hpb=ee8403d4eb5760187d62b42a9cf4272de8fc0ec4;p=mothur.git diff --git a/summarycommand.h b/summarycommand.h index 1d93a33..4936dd8 100644 --- a/summarycommand.h +++ b/summarycommand.h @@ -25,6 +25,7 @@ public: vector setParameters(); string getCommandName() { return "summary.single"; } string getCommandCategory() { return "OTU-Based Approaches"; } + string getOutputFileNameTag(string, string); string getHelpString(); string getCitation() { return "http://www.mothur.org/wiki/Summary.single"; } string getDescription() { return "generate summary file that has the calculator value for each line in the OTU data"; } @@ -48,7 +49,7 @@ private: vector parseSharedFile(string); vector createGroupSummaryFile(int, int, vector&, map); - int process(SAbundVector*&, ofstream&, ofstream&, ofstream&); + int process(SAbundVector*&, ofstream&, ofstream&); };