X-Git-Url: https://git.donarmstrong.com/?a=blobdiff_plain;f=summarycommand.cpp;h=638119543480ffe0a8364379edfef0b184c526bf;hb=7588ff51d365aad66f455694afb90b6fd3e6639a;hp=208544adf1bd7ec2f0f59603c4eb86840275cf80;hpb=43921e55e68146936cf72f65fbc92553bc05977b;p=mothur.git diff --git a/summarycommand.cpp b/summarycommand.cpp index 208544a..6381195 100644 --- a/summarycommand.cpp +++ b/summarycommand.cpp @@ -100,7 +100,7 @@ SummaryCommand::SummaryCommand(string option) { temp = validParameter.validFile(parameters, "size", false); if (temp == "not found") { temp = "0"; } convert(temp, size); - temp = validParameter.validFile(parameters, "groupmode", false); if (temp == "not found") { temp = "F"; } + temp = validParameter.validFile(parameters, "groupmode", false); if (temp == "not found") { temp = "T"; } groupMode = m->isTrue(temp); @@ -123,7 +123,7 @@ void SummaryCommand::help(){ m->mothurOut("Example summary.single(label=unique-.01-.03, calc=sobs-chao-ace-jack-bootstrap-shannon-npshannon-simpson).\n"); validCalculator->printCalc("summary", cout); m->mothurOut("The default value calc is sobs-chao-ace-jack-shannon-npshannon-simpson\n"); - m->mothurOut("If you are running summary.single with a shared file and would like your summary results collated in one file, set groupmode=t. (Default=False).\n"); + m->mothurOut("If you are running summary.single with a shared file and would like your summary results collated in one file, set groupmode=t. (Default=true).\n"); m->mothurOut("The label parameter is used to analyze specific labels in your input.\n"); m->mothurOut("Note: No spaces between parameter labels (i.e. label), '=' and parameters (i.e.yourLabels).\n\n"); }