X-Git-Url: https://git.donarmstrong.com/?a=blobdiff_plain;f=summarycommand.cpp;h=39972cef649a1c34443b0ae36117a48f8b776cbd;hb=e4827e0945cbda536064e5a345996b2a7dfcbb81;hp=8632ad4a42c9c9dba91bcccf6528e7ced436f70b;hpb=d59f91eb1230d2c7867a92cb86138b7003100ab4;p=mothur.git diff --git a/summarycommand.cpp b/summarycommand.cpp index 8632ad4..39972ce 100644 --- a/summarycommand.cpp +++ b/summarycommand.cpp @@ -22,6 +22,7 @@ #include "qstat.h" #include "bergerparker.h" #include "bstick.h" +#include "coverage.h" //********************************************************************************************************************** @@ -37,9 +38,11 @@ SummaryCommand::SummaryCommand(){ sumCalculators.push_back(new Sobs()); }else if(globaldata->Estimators[i] == "chao"){ sumCalculators.push_back(new Chao1()); - }else if(globaldata->Estimators[i] == "geom"){ + }else if(globaldata->Estimators[i] == "coverage"){ + sumCalculators.push_back(new Coverage()); + }else if(globaldata->Estimators[i] == "geometric"){ sumCalculators.push_back(new Geom()); - }else if(globaldata->Estimators[i] == "logsd"){ + }else if(globaldata->Estimators[i] == "logseries"){ sumCalculators.push_back(new LogSD()); }else if(globaldata->Estimators[i] == "qstat"){ sumCalculators.push_back(new QStat());