X-Git-Url: https://git.donarmstrong.com/?a=blobdiff_plain;f=subsamplecommand.cpp;h=c352feb099a83879bae9e1aca0f35d5bfe56e691;hb=2bb9267aa4b4ecdf8488b06605cc9f3f36fa4332;hp=fe9e93423969796187dd59452f7e3a3496d4ee57;hpb=0ca63a8165baa0afa459e644ebe140ba496d5ba0;p=mothur.git

diff --git a/subsamplecommand.cpp b/subsamplecommand.cpp
index fe9e934..c352feb 100644
--- a/subsamplecommand.cpp
+++ b/subsamplecommand.cpp
@@ -255,6 +255,10 @@ SubSampleCommand::SubSampleCommand(string option) {
 			if ((groupfile != "") && ((fastafile != "") && (listfile != ""))) { 
 				m->mothurOut("A new group file can only be made from the subsample of a listfile or fastafile, not both. Please correct."); m->mothurOutEndLine(); abort = true; }
 			
+			if ((fastafile != "") && (namefile == "")) {
+				vector<string> files; files.push_back(fastafile);
+				parser.getNameFile(files);
+			}
 		}
 
 	}