X-Git-Url: https://git.donarmstrong.com/?a=blobdiff_plain;f=src%2Ftoolkit%2Fbamtools_resolve.cpp;h=cdf53eeeca9de0eb99e1a923431e82ea1f054a57;hb=270452a6f0a98cb1e4260b5501fe780c9b1806c0;hp=8be405fa8b2a49a12bb77eb91b5e46d0f6fbf8f5;hpb=6a3fd9818d23876a2503a592fc6a806c6e6bc9bb;p=bamtools.git diff --git a/src/toolkit/bamtools_resolve.cpp b/src/toolkit/bamtools_resolve.cpp index 8be405f..cdf53ee 100644 --- a/src/toolkit/bamtools_resolve.cpp +++ b/src/toolkit/bamtools_resolve.cpp @@ -1,9 +1,8 @@ // *************************************************************************** // bamtools_resolve.cpp (c) 2011 // Marth Lab, Department of Biology, Boston College -// All rights reserved. // --------------------------------------------------------------------------- -// Last modified: 6 July 2011 +// Last modified: 12 October 2011 // --------------------------------------------------------------------------- // Resolves paired-end reads (marking the IsProperPair flag as needed). // *************************************************************************** @@ -1030,7 +1029,7 @@ void ResolveTool::ResolveToolPrivate::ParseHeader(const SamHeader& header) { SamReadGroupConstIterator rgIter = header.ReadGroups.ConstBegin(); SamReadGroupConstIterator rgEnd = header.ReadGroups.ConstEnd(); for ( ; rgIter != rgEnd; ++rgIter ) { - const SamReadGroup& rg = (*rgIter); + const SamReadGroup& rg = rgIter->second; m_readGroups.insert( make_pair(rg.ID, ReadGroupResolver()) ); } }