X-Git-Url: https://git.donarmstrong.com/?a=blobdiff_plain;f=src%2Ftoolkit%2Fbamtools_convert.cpp;fp=src%2Ftoolkit%2Fbamtools_convert.cpp;h=f3bc486d85df74f7abb956e7d65ce8b03c801a85;hb=4a2da65db87a3fd7db8f77d416c184a413b9f34f;hp=802580201c958b3ebf77a602a4003a2eb0fd7fcf;hpb=1c3e9e8c0a913b28f370c7d07a1b520b308b9981;p=bamtools.git diff --git a/src/toolkit/bamtools_convert.cpp b/src/toolkit/bamtools_convert.cpp index 8025802..f3bc486 100644 --- a/src/toolkit/bamtools_convert.cpp +++ b/src/toolkit/bamtools_convert.cpp @@ -3,7 +3,7 @@ // Marth Lab, Department of Biology, Boston College // All rights reserved. // --------------------------------------------------------------------------- -// Last modified: 7 April 2011 +// Last modified: 11 June 2011 // --------------------------------------------------------------------------- // Converts between BAM and a number of other formats // *************************************************************************** @@ -295,7 +295,7 @@ void ConvertTool::ConvertToolPrivate::PrintFasta(const BamAlignment& a) { // N.B. - QueryBases are reverse-complemented if aligned to reverse strand // print header - m_out << "> " << a.Name << endl; + m_out << ">" << a.Name << endl; // handle reverse strand alignment - bases string sequence = a.QueryBases;