X-Git-Url: https://git.donarmstrong.com/?a=blobdiff_plain;f=src%2FMakefile.am;h=e3cbee3e404df3b8801d888ef6c946b899e646e9;hb=42c2a6b10b6313b7f87189f1467996fc3cf18e24;hp=84707f23fe3f31e564e56fc81f943deb8ab876e8;hpb=bcdcb70445c167236311be383233e8dff4c9d54c;p=fastq-tools.git diff --git a/src/Makefile.am b/src/Makefile.am index 84707f2..e3cbee3 100644 --- a/src/Makefile.am +++ b/src/Makefile.am @@ -1,29 +1,26 @@ -bin_PROGRAMS = fastq-grep fastq-kmers fastq-match fastq-uniq fastq-qual fastq-sample fastq-qualadj +bin_PROGRAMS = fastq-grep fastq-kmers fastq-match fastq-uniq fastq-qual fastq-sample fastq-qualadj fastq-sort fastq_common_src=common.h common.c fastq_parse_src=parse.h parse.c fastq_sw_src=sw.h sw.c -fastq_hash_src=hash.h hash.c +fastq_hash_table_src=hash_table.h hash_table.c fastq_rng_src=rng.h rng.c fastq_grep_SOURCES = fastq-grep.c $(fastq_common_src) $(fastq_parse_src) -fastq_grep_LDADD = $(PCRE_LIBS) -lz +fastq_grep_LDADD = $(PCRE_LIBS) fastq_kmers_SOURCES = fastq-kmers.c $(fastq_common_src) $(fastq_parse_src) -fastq_kmers_LDADD = -lz fastq_match_SOURCES = fastq-match.c $(fastq_common_src) $(fastq_parse_src) $(fastq_sw_src) -fastq_match_LDADD = -lz -fastq_uniq_SOURCES = fastq-uniq.c $(fastq_common_src) $(fastq_parse_src) $(fastq_hash_src) -fastq_uniq_LDADD = -lz +fastq_uniq_SOURCES = fastq-uniq.c $(fastq_common_src) $(fastq_parse_src) $(fastq_hash_table_src) fastq_qual_SOURCES = fastq-qual.c $(fastq_common_src) $(fastq_parse_src) -fastq_qual_LDADD = -lz fastq_sample_SOURCES = fastq-sample.c $(fastq_common_src) $(fastq_parse_src) $(fastq_rng_src) -fastq_sample_LDADD = -lz fastq_qualadj_SOURCES = fastq-qualadj.c $(fastq_common_src) $(fastq_parse_src) -fastq_qualadj_LDADD = -lz + +fastq_sort_SOURCES = fastq-sort.c $(fastq_common_src) $(fastq_parse_src) +