X-Git-Url: https://git.donarmstrong.com/?a=blobdiff_plain;f=src%2FMakefile.am;h=c50f420bcd01e4396244e757fb4beec46d82b109;hb=48a5939e574874106f1450fd278f602b731d2a83;hp=202e6c2adf1375cbb2dd08b699d0ff970d446edc;hpb=1a97afb4a336f49f700eae050908c3e68f415ee6;p=fastq-tools.git

diff --git a/src/Makefile.am b/src/Makefile.am
index 202e6c2..c50f420 100644
--- a/src/Makefile.am
+++ b/src/Makefile.am
@@ -1,10 +1,15 @@
 
-bin_PROGRAMS = fastq-grep fastq-kmers
+SUBDIRS = swsse2
 
-fastq_grep_SOURCES = kseq.h fastq-grep.c
+bin_PROGRAMS = fastq-grep fastq-kmers fastq-match
+
+fastq_grep_SOURCES = kseq.h fastq-grep.c fastq-parse.c fastq-common.c
 fastq_grep_LDADD = $(PCRE_LIBS) -lz
 
-fastq_kmers_SOURCES = kseq.h fastq-kmers.c
+fastq_kmers_SOURCES = kseq.h fastq-kmers.c fastq-parse.c fastq-common.c
 fastq_kmers_LDADD = -lz
 
+fastq_match_SOURCES = kseq.h fastq-match.c fastq-parse.c fastq-common.c
+fastq_match_LDADD   = swsse2/libswsse2.la -lz
+fastq_match_CFLAGS  = -msse2