X-Git-Url: https://git.donarmstrong.com/?a=blobdiff_plain;f=splitmatrix.h;h=b8aa55119c810871988e76ca156b1746bd4eeb4a;hb=2c97dd48b8e27ee0a6a86c7a082f4c504c3357c6;hp=acaa8c5b711a220e76e48be2fc983122514d6b32;hpb=814675616c10a40911886afb9dfe216f0245e3a2;p=mothur.git

diff --git a/splitmatrix.h b/splitmatrix.h
index acaa8c5..b8aa551 100644
--- a/splitmatrix.h
+++ b/splitmatrix.h
@@ -20,7 +20,7 @@ class SplitMatrix  {
 	public:
 
 		SplitMatrix(string, string, string, float, string, bool); //column formatted distance file, namesfile, cutoff, method, large
-		SplitMatrix(string, string, string, float, string, int, string); //fastafile, namefile, taxFile, cutoff, method, processors, outputDir
+		SplitMatrix(string, string, string, float, float, string, int, bool, string); //fastafile, namefile, taxFile, taxcutoff, cutoff, method, processors, classic, outputDir
 		
 		~SplitMatrix();
 		int split();
@@ -32,8 +32,8 @@ class SplitMatrix  {
 
 		string distFile, namefile, singleton, method, taxFile, fastafile, outputDir;
 		vector< map< string, string> > dists;
-		float cutoff;
-		bool large;
+		float cutoff, distCutoff;
+		bool large, classic;
 		int processors;
 				
 		int splitDistance();