X-Git-Url: https://git.donarmstrong.com/?a=blobdiff_plain;f=splitmatrix.cpp;fp=splitmatrix.cpp;h=ec71e5bfd0090b1172d50403a6b54903a030c3f4;hb=cbb336d5650cfe1f83a398a837794dcfbbbd3756;hp=dcc5b50ef8b396d9186c755c3ba949f9c789cf64;hpb=09ce41fb228c00d0f49896c66b2f2c5760914769;p=mothur.git

diff --git a/splitmatrix.cpp b/splitmatrix.cpp
index dcc5b50..ec71e5b 100644
--- a/splitmatrix.cpp
+++ b/splitmatrix.cpp
@@ -77,7 +77,7 @@ int SplitMatrix::splitDistance(){
 int SplitMatrix::splitClassify(){
 	try {
 		cutoff = int(cutoff);
-		
+				
 		map<string, int> seqGroup;
 		map<string, int>::iterator it;
 		map<string, int>::iterator it2;
@@ -182,7 +182,7 @@ int SplitMatrix::createDistanceFilesFromTax(map<string, int>& seqGroup, int numG
 		//process each distance file
 		for (int i = 0; i < numGroups; i++) { 
 			
-			string options = "fasta=" + (fastafile + "." + toString(i) + ".temp") + ", processors=" + toString(processors) + ", cutoff=" + toString(distCutoff);
+			string options = "fasta=" + (fastafile + "." + toString(i) + ".temp") + ", processors=" + toString(1) + ", cutoff=" + toString(distCutoff);
 			
 			Command* command = new DistanceCommand(options);
 			command->execute();