X-Git-Url: https://git.donarmstrong.com/?a=blobdiff_plain;f=splitgroupscommand.h;h=c45c7ff6b386111ba34897c3e13ff213e832b79f;hb=45b880733289694b2a23c9dc8a774aa626458f81;hp=f6e8760e11ef8e02661dc275f22bc94414aa1517;hpb=cea46f0830d8d1a6dc26e3410fc283d26c355831;p=mothur.git diff --git a/splitgroupscommand.h b/splitgroupscommand.h index f6e8760..c45c7ff 100644 --- a/splitgroupscommand.h +++ b/splitgroupscommand.h @@ -24,7 +24,12 @@ class SplitGroupCommand : public Command { public: SplitGroupCommand(string); + SplitGroupCommand(); ~SplitGroupCommand(); + vector getRequiredParameters(); + vector getValidParameters(); + vector getRequiredFiles(); + map > getOutputFiles() { return outputTypes; } int execute(); void help(); @@ -34,6 +39,7 @@ private: int splitFasta(); vector outputNames; + map > outputTypes; map > nameMap; map >::iterator itNames; GroupMap* groupMap;